RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TAS2R46P59540 309 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 FXYD4P59646 89 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 CBX3Q13185 183 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 FAAP20Q6NZ36 180 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF562Q6V9R5 426 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 GTSCR1Q86UQ5 136 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF645Q8N7E2 425 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-214ENST00000580073 DDB2Q92466 427 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF2Q9BSG1 426 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-214ENST00000580073 RANGRFQ9HD47 186 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-214ENST00000580073 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
TRAF4-214ENST00000580073 NUBP2Q9Y5Y2 271 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 DNAH7Q8WXX0 4024 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 SOX15O60248 233 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 IGHV3-11P01762 117 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 IGKV1-16P04430 117 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 IFNA6P05013 189 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 GNRHRP30968 328 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 AADACL3Q5VUY0 350 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 MFSD4AQ8N468 514 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 TMEM229BQ8NBD8 167 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 C15orf40Q8WUR7 153 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 SECTM1Q8WVN6 248 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 TRIM63Q969Q1 353 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 MRGPRFQ96AM1 343 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 MOB3AQ96BX8 217 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 TMEM68Q96MH6 324 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 SRRQ9GZT4 340 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 TPSG1Q9NRR2 321 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF355PQ9NSJ1 428 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 FBXO7Q9Y3I1 522 aa10.28□□□□□ -0.76
TRAF4-214ENST00000580073 RBM7Q9Y580 266 aaKnown RBP10.28□□□□□ -0.76
TRAF4-214ENST00000580073 CA2P00918 260 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 IGLV1-51P01701 117 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 S100A5P33763 92 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 MRPS10P82664 201 aaKnown RBP10.27□□□□□ -0.77
TRAF4-214ENST00000580073 BAK1Q16611 211 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 PYDC2Q56P42 97 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 LCN12Q6JVE5 192 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 TMEM17Q86X19 198 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 POC5Q8NA72 575 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 BVESQ8NE79 360 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 LFNGQ8NES3 379 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 RHOVQ96L33 236 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 THAP7Q9BT49 309 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-214ENST00000580073 SLC5A7Q9GZV3 580 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 BATF3Q9NR55 127 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 RABL2AQ9UBK7 228 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-214ENST00000580073 RABL2BQ9UNT1 228 aa10.27□□□□□ -0.77
TRAF4-214ENST00000580073 ANKRD20A5PA0PJZ0 165 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
TRAF4-214ENST00000580073 TNFSF12O43508 249 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 SSBP1Q04837 148 aaKnown RBP10.26□□□□□ -0.77
TRAF4-214ENST00000580073 TATDN3Q17R31 274 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 STEAP1BQ6NZ63 245 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 OR4C16Q8NGL9 310 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 IL17DQ8TAD2 202 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 MS4A10Q96PG2 267 aa10.26□□□□□ -0.77
TRAF4-214ENST00000580073 FAM103A1Q9BTL3 118 aaKnown RBP10.26□□□□□ -0.77
TRAF4-214ENST00000580073 RYR2Q92736 4967 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 JTBO76095 146 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 CNIH1O95406 144 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 RAB3DO95716 219 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 IGLV2-23P01705 113 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 PTBP1P26599 531 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAF4-214ENST00000580073 LGALS7P47929 136 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 TAS2R19P59542 299 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 RPS16P62249 146 aaKnown RBP10.25□□□□□ -0.77
TRAF4-214ENST00000580073 KLF9Q13886 244 aaPredicted RBP10.25□□□□□ -0.77
TRAF4-214ENST00000580073 PSG5Q15238 335 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 MRGPRG-AS1Q2M3A8 158 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 RNASE10Q5GAN6 216 aaKnown RBP10.25□□□□□ -0.77
TRAF4-214ENST00000580073 Q8N402 240 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 CASTOR1Q8WTX7 329 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 CLCC1Q96S66 551 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 AKIP1Q9NQ31 210 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 SLC35D1Q9NTN3 355 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 TAS2R8Q9NYW2 309 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 TNCP24821 2201 aa10.25□□□□□ -0.77
TRAF4-214ENST00000580073 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
TRAF4-214ENST00000580073 FCN1O00602 326 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 EGR2P11161 476 aaPredicted RBP10.24□□□□□ -0.77
TRAF4-214ENST00000580073 HERV-K104P61576 105 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 TSPAN5P62079 268 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 TAGLNQ01995 201 aaKnown RBP10.24□□□□□ -0.77
TRAF4-214ENST00000580073 FXYD3Q14802 87 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 MSMO1Q15800 293 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 OR2B11Q5JQS5 317 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 FAM209BQ5JX69 171 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 ZFAND6Q6FIF0 208 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 OR9G4Q8NGQ1 327 aa10.24□□□□□ -0.77
TRAF4-214ENST00000580073 TUBA4BQ9H853 241 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms