RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 RAMP3O60896 148 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 RLN1P04808 185 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 NQO2P16083 231 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 KIAA0141Q14154 515 aaPredicted RBP13.59□□□□□ -0.23
ITGB4-205ENST00000579211 RNASE10Q5GAN6 216 aaKnown RBP13.59□□□□□ -0.23
ITGB4-205ENST00000579211 KPRPQ5T749 579 aaPredicted RBP13.59□□□□□ -0.23
ITGB4-205ENST00000579211 REC114Q7Z4M0 266 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 ABHD1Q96SE0 405 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 SPIN2AQ99865 258 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 SPIN2BQ9BPZ2 258 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 MIXL1Q9H2W2 232 aa13.59□□□□□ -0.23
ITGB4-205ENST00000579211 I3L521 148 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 PGLYRP1O75594 196 aaPredicted RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 MAS1LP35410 378 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 BRWD1-AS2P59051 145 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 TAS2R31P59538 309 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 ERVK-16P61578 105 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 SSBP2P81877 361 aaPredicted RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 MRPS10P82664 201 aaKnown RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 RUNX1Q01196 453 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 PHLDA2Q53GA4 152 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 TMEM167AQ8TBQ9 72 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 FYTTD1Q96QD9 318 aaKnown RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 FXYD6Q9H0Q3 95 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 ALX4Q9H161 411 aaPredicted RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 RABL2AQ9UBK7 228 aaPredicted RBP13.58□□□□□ -0.24
ITGB4-205ENST00000579211 MTFP1Q9UDX5 166 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 RABL2BQ9UNT1 228 aa13.58□□□□□ -0.24
ITGB4-205ENST00000579211 LINC01619G3V211 115 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 GABARAPH6UMI1 98 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 OR9G9P0C7N8 305 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 PGAM2P15259 253 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 RPL27AP46776 148 aaKnown RBP13.57□□□□□ -0.24
ITGB4-205ENST00000579211 MRGPRG-AS1Q2M3A8 158 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 OR4A47Q6IF82 309 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 SLC25A42Q86VD7 318 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
ITGB4-205ENST00000579211 OR4A5Q8NH83 315 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 MCFD2Q8NI22 146 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 ZMAT5Q9UDW3 170 aaKnown RBP13.57□□□□□ -0.24
ITGB4-205ENST00000579211 CEPT1Q9Y6K0 416 aa13.57□□□□□ -0.24
ITGB4-205ENST00000579211 CD3DP04234 171 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 F2RP25116 425 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
ITGB4-205ENST00000579211 LPAR6P43657 344 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 TAS2R19P59542 299 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 RPL8P62917 257 aaKnown RBP13.56□□□□□ -0.24
ITGB4-205ENST00000579211 VAX1Q5SQQ9 334 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 SLC38A6Q8IZM9 456 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 DGCR14Q96DF8 476 aaKnown RBP13.56□□□□□ -0.24
ITGB4-205ENST00000579211 TINAGL1Q9GZM7 467 aaPredicted RBP13.56□□□□□ -0.24
ITGB4-205ENST00000579211 PLEKHA2Q9HB19 425 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 BET1LQ9NYM9 111 aa13.56□□□□□ -0.24
ITGB4-205ENST00000579211 SEC14L6B5MCN3 397 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 S1PR2O95136 353 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 HSPB1P04792 205 aaKnown RBP13.55□□□□□ -0.24
ITGB4-205ENST00000579211 RPA2P15927 270 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 TBPP20226 339 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 DGCR2P98153 550 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 SSBP1Q04837 148 aaKnown RBP13.55□□□□□ -0.24
ITGB4-205ENST00000579211 FHL3Q13643 280 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 SCGB2B2Q4G0G5 96 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 C10orf55Q5SWW7 151 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 C9orf66Q5T8R8 295 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 ARRDC1Q8N5I2 433 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 TMEM229BQ8NBD8 167 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 MRAPQ8TCY5 172 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 RSRP1Q9BUV0 290 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 COMMD5Q9GZQ3 224 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 TGP01266 2768 aa13.55□□□□□ -0.24
ITGB4-205ENST00000579211 IGHV4OR15-8A0A075B7B6 117 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 A0A087WW49 117 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 ANKRD34BA5PLL1 514 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 RAB3DO95716 219 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 HLA-GP17693 338 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 UCP3P55916 312 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 STEAP1BQ6NZ63 245 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 TBC1D26Q86UD7 250 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 USMG5Q96IX5 58 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 RANGRFQ9HD47 186 aaPredicted RBP13.54□□□□□ -0.24
ITGB4-205ENST00000579211 TMEM140Q9NV12 185 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
ITGB4-205ENST00000579211 COMMD9Q9P000 198 aa13.54□□□□□ -0.24
ITGB4-205ENST00000579211 RSL24D1Q9UHA3 163 aaKnown RBP13.54□□□□□ -0.24
ITGB4-205ENST00000579211 FABP12A6NFH5 140 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 OVOL1O14753 267 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 DHFRP00374 187 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 KRASP01116 189 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 S100A5P33763 92 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 SLURP1P55000 103 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 TTC9CQ8N5M4 171 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 ADAD2Q8NCV1 583 aaKnown RBP13.53□□□□□ -0.24
ITGB4-205ENST00000579211 DCUN1D4Q92564 292 aa13.53□□□□□ -0.24
ITGB4-205ENST00000579211 SLIRPQ9GZT3 109 aaKnown RBP13.53□□□□□ -0.24
ITGB4-205ENST00000579211 MARCH11A6NNE9 402 aa13.52□□□□□ -0.25
ITGB4-205ENST00000579211 DISC1C4P0D8 188 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms