RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-218	ENST00000578469	MC5R	P33032	325 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	SULT1A1	P50225	295 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	RAB13	P51153	203 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	SPCS3	P61009	180 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	HLA-DRB5	Q30154	266 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	AARD	Q4LEZ3	155 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	USF3	Q68DE3	2245 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	C1orf122	Q6ZSJ8	110 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	PRIMA1	Q86XR5	153 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	PDPN	Q86YL7	162 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	LRRC75A-AS1	Q8N1F1	130 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	KIR3DL3	Q8N743	410 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	OR52E5	Q8NH55	327 aa		13.77	□□□□□ -0.21
SREBF1-218	ENST00000578469	ATR	Q13535	2644 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	STAB1	Q9NY15	2570 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	SHOX	O15266	292 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	DFFB	O76075	338 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	CST7	O76096	145 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	SCAF4	O95104	1147 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	IGLV1-47	P01700	117 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	COX7A1	P24310	79 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	REG1B	P48304	166 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	ARF6	P62330	175 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	SPANXN5	Q5MJ07	72 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	SPATA3	Q8NHX4	192 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	DTD1	Q8TEA8	209 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	LHX4	Q969G2	390 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	FLYWCH2	Q96CP2	140 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	BSCL2	Q96G97	398 aa	Predicted RBP	13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	MDFI	Q99750	246 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	PIMREG	Q9BSJ6	248 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	QTRT1	Q9BXR0	403 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	BPESC1	Q9GZL8	116 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	NUP50	Q9UKX7	468 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469	WASHC3	Q9Y3C0	194 aa		13.76	□□□□□ -0.21
SREBF1-218	ENST00000578469		H3BP45	60 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	BUB1B-PAK6	H3BSN5	160 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	NDUFS8	O00217	210 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	NMB	P08949	121 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	PRTN3	P24158	256 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	DYNLT3	P51808	116 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	OR2B8P	P59922	312 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	HBG1	P69891	147 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	HBG2	P69892	147 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	RPP30	P78346	268 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	RELB	Q01201	579 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	TMEM177	Q53S58	311 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	OR4A47	Q6IF82	309 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	ZNF429	Q86V71	674 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	VKORC1L1	Q8N0U8	176 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	PNKD	Q8N490	385 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	OR4C13	Q8NGP0	309 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	OR5C1	Q8NGR4	320 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	CLDND2	Q8NHS1	167 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	RNF141	Q8WVD5	230 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	PCNP	Q8WW12	178 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	TMED6	Q8WW62	240 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	ARV1	Q9H2C2	271 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	WFDC1	Q9HC57	220 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	PRND	Q9UKY0	176 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	STRAP	Q9Y3F4	350 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	MALRD1	Q5VYJ5	2156 aa		13.75	□□□□□ -0.21
SREBF1-218	ENST00000578469	C15orf61	A6NNL5	157 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469		A8MXK9	166 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	SMAD7	O15105	426 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	FOXH1	O75593	365 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	ATP5J2	P56134	94 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	CLINT1	Q14677	625 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	FAM74A1	Q5RGS3	127 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	CLEC2A	Q6UVW9	174 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	PRSS57	Q6UWY2	283 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	TMEM217	Q8N7C4	229 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469		Q8N7P7	452 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	FAM168A	Q92567	244 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	HARBI1	Q96MB7	349 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469		Q96MF0	132 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	TSNAX	Q99598	290 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	GINS3	Q9BRX5	216 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	FKBP11	Q9NYL4	201 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	BET1L	Q9NYM9	111 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	PFDN2	Q9UHV9	154 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	KPTN	Q9Y664	436 aa		13.74	□□□□□ -0.21
SREBF1-218	ENST00000578469	DOCK11	Q5JSL3	2073 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	UPK2	O00526	184 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	IFNA5	P01569	189 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	METTL15P1	P0C7V9	234 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	CEACAM3	P40198	252 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	RPS16	P62249	146 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	STPG2	Q8N412	459 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	OR11H6	Q8NGC7	330 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	VSTM2A	Q8TAG5	236 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	RPE	Q96AT9	228 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	ATP5S	Q99766	215 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	HIPK2	Q9H2X6	1198 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	ENY2	Q9NPA8	101 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	MED9	Q9NWA0	146 aa		13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	FOXA2	Q9Y261	457 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-218	ENST00000578469	INSIG2	Q9Y5U4	225 aa		13.73	□□□□□ -0.21

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