RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 DIRAS2Q96HU8 199 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 GPHA2Q96T91 129 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 KLK11Q9UBX7 282 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 MTFP1Q9UDX5 166 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 VSIG4Q9Y279 399 aa12.42□□□□□ -0.42
VAPA-204ENST00000577901 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 RBFOX2O43251 390 aaKnown RBP eCLIP12.41□□□□□ -0.42
VAPA-204ENST00000577901 OR2A4O95047 310 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 SAA1P0DJI8 122 aaPredicted RBP12.41□□□□□ -0.42
VAPA-204ENST00000577901 S100GP29377 79 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 BRWD1-AS2P59051 145 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 TNXAQ16473 311 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 AADACL3Q5VUY0 350 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 IDO2Q6ZQW0 420 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 MMD2Q8IY49 270 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 ZNF491Q8N8L2 437 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 MCFD2Q8NI22 146 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 OR2A7Q96R45 310 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 PHB2Q99623 299 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 SLIRPQ9GZT3 109 aaKnown RBP12.41□□□□□ -0.42
VAPA-204ENST00000577901 SLA2Q9H6Q3 261 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 SACSQ9NZJ4 4579 aa12.41□□□□□ -0.42
VAPA-204ENST00000577901 GPR31O00270 319 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 SOX15O60248 233 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 HPRT1P00492 218 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 TBPP20226 339 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 SSBP2P81877 361 aaPredicted RBP12.4□□□□□ -0.42
VAPA-204ENST00000577901 SSBP1Q04837 148 aaKnown RBP12.4□□□□□ -0.42
VAPA-204ENST00000577901 IL18Q14116 193 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.42
VAPA-204ENST00000577901 VKORC1L1Q8N0U8 176 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 OR51H1Q8NH63 302 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 RHOVQ96L33 236 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 ZNF430Q9H8G1 570 aaPredicted RBP12.4□□□□□ -0.42
VAPA-204ENST00000577901 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
VAPA-204ENST00000577901 RSL24D1Q9UHA3 163 aaKnown RBP12.4□□□□□ -0.42
VAPA-204ENST00000577901 ZNF256Q9Y2P7 627 aaPredicted RBP12.4□□□□□ -0.42
VAPA-204ENST00000577901 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 H3BUA1 57 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 M0QYG6 137 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 PGLYRP1O75594 196 aaPredicted RBP12.39□□□□□ -0.43
VAPA-204ENST00000577901 UCP3P55916 312 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 TAS2R31P59538 309 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 TAS2R19P59542 299 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 FHL3Q13643 280 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 KIAA0141Q14154 515 aaPredicted RBP12.39□□□□□ -0.43
VAPA-204ENST00000577901 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 TMEM229BQ8NBD8 167 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 OR5T1Q8NG75 326 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
VAPA-204ENST00000577901 MS4A10Q96PG2 267 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 SPIN2AQ99865 258 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 SPIN2BQ9BPZ2 258 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 FXYD6Q9H0Q3 95 aa12.39□□□□□ -0.43
VAPA-204ENST00000577901 CTDSPLO15194 276 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 MPPED1O15442 326 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 KBTBD11O94819 623 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 TRGV3P03979 118 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 CD3DP04234 171 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 RLN1P04808 185 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 NQO2P16083 231 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 MAS1LP35410 378 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 TPPP2P59282 170 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 SLC38A6Q8IZM9 456 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 PUSL1Q8N0Z8 303 aaKnown RBP12.38□□□□□ -0.43
VAPA-204ENST00000577901 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 OR11H1Q8NG94 326 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 OR1N2Q8NGR9 330 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 OR4A5Q8NH83 315 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 TMEM167AQ8TBQ9 72 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 CASTOR1Q8WTX7 329 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 NXF2Q9GZY0 626 aaKnown RBP12.38□□□□□ -0.43
VAPA-204ENST00000577901 PLEKHA2Q9HB19 425 aa12.38□□□□□ -0.43
VAPA-204ENST00000577901 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 ZNF701M0R085 212 aaPredicted RBP12.37□□□□□ -0.43
VAPA-204ENST00000577901 LY86O95711 162 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 RAB3DO95716 219 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 F2RP25116 425 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 TNFSF8P32971 234 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 RUNX1Q01196 453 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 DGCR14Q96DF8 476 aaKnown RBP12.37□□□□□ -0.43
VAPA-204ENST00000577901 OR5B12Q96R08 314 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 RSRP1Q9BUV0 290 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
VAPA-204ENST00000577901 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 HRASLSQ9HDD0 168 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 SMAD5-AS1Q9Y6J3 95 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 STAB2Q8WWQ8 2551 aa12.37□□□□□ -0.43
VAPA-204ENST00000577901 A0A0G2JLM5 398 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 I3L521 148 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 BRI3O95415 125 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 ERVK-16P61578 105 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 ASPHD1Q5U4P2 390 aa12.36□□□□□ -0.43
VAPA-204ENST00000577901 OR4A47Q6IF82 309 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms