RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 TREM2Q9NZC2 230 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 WIPI2Q9Y4P8 454 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TRAV17A0A0B4J275 112 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 LRRC30A6NM36 301 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 PPP1R2P9O14990 202 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 SPRY3O43610 288 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 LMO1P25800 156 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 S100PP25815 95 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TFF3Q07654 80 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 WDR82Q6UXN9 313 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 VKORC1L1Q8N0U8 176 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 RPP25LQ8N5L8 163 aaKnown RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 GATAD1Q8WUU5 269 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 PSMG3Q9BT73 122 aaPredicted RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 AURKAIP1Q9NWT8 199 aaPredicted RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 CISD1Q9NZ45 108 aaKnown RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 PROCRQ9UNN8 238 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 FRYQ5TBA9 3013 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 NPIPB11E5RHQ5 1161 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 M0R1B8 84 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TNFRSF1AP19438 455 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 COX5AP20674 150 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 PRDX2P32119 198 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 ZNF134P52741 427 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 WDR25Q64LD2 544 aaPredicted RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 FAM90A2PQ658T7 463 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 SLC35E4Q6ICL7 350 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 ACSM6Q6P461 480 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 LEAP2Q969E1 77 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 R3HDM4Q96D70 268 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 LOXL4Q96JB6 756 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 OR5B12Q96R08 314 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TAAR6Q96RI8 345 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 SSX3Q99909 188 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 ACTR3CQ9C0K3 210 aaPredicted RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 GSN-AS1Q9NRJ2 163 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 GAR1Q9NY12 217 aaKnown RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 LAMP3Q9UQV4 416 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TNRC18O15417 2968 aaPredicted RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 TNRC6BQ9UPQ9 1833 aaKnown RBP4.45□□□□□ -1.7
VAPA-203ENST00000577539 MUC3AQ02505 3323 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 A0A1W2PPV4 95 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 H7BYZ3 331 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 PAGE4O60829 102 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 TGFAP01135 160 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 IGKV1D-33P01593 117 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 IGKV1-33P01594 117 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 ERVK-16P61578 105 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 MEF2BQ02080 365 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 FAM201AQ5SY85 155 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 SPNS3Q6ZMD2 512 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 Q6ZR03 302 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CA5BP1Q8WTZ4 195 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 MBD3L1Q8WWY6 194 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 GPR61Q9BZJ8 451 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 SIRT7Q9NRC8 400 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CLCF1Q9UBD9 225 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 DMDP11532 3685 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CHD3Q12873 2000 aaKnown RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 NBASA2RRP1 2371 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 TRAV1-1A0A0B4J248 108 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 A0A1W2PPQ1 181 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 MARCH11A6NNE9 402 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 LINC00473A8K010 186 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 IGHV2-5P01817 119 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CRYAAP02489 173 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 GYPEP15421 78 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 FAM3BP58499 235 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 PNRC1Q12796 327 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 GFI1BQ5VTD9 330 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 TMEM14EPQ6UXP3 125 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 WDR31Q8NA23 367 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 ZNRF1Q8ND25 227 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 S100PBPQ96BU1 408 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CIB3Q96Q77 187 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 PATZ1Q9HBE1 687 aaKnown RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 TNRC6AQ8NDV7 1962 aaKnown RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 ZFHX2Q9C0A1 2572 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 A0A087WWC5 75 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CTXND1A0A1B0GTU2 59 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BKO60814 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CLDN14O95500 239 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 CYB5R3P00387 301 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BJP06899 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 FABP4P15090 132 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 WT1P19544 449 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BOP23527 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BBP33778 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BDP58876 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BCP62807 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 S100A12P80511 92 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST2H2BEQ16778 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 BSXQ3C1V8 233 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 PDLIM3Q53GG5 364 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms