RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FHL3Q13643 280 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 ASPHD1Q5U4P2 390 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 TMEM167AQ8TBQ9 72 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 DIRAS2Q96HU8 199 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 FXYD6Q9H0Q3 95 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 CEPT1Q9Y6K0 416 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 GABARAPH6UMI1 98 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 MPPED1O15442 326 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 BRI3O95415 125 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 MAS1LP35410 378 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 TAS2R31P59538 309 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 ZNF616Q08AN1 781 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 RNASE10Q5GAN6 216 aaKnown RBP18.23■□□□□ 0.51
SNF8-217ENST00000576353 FOXB2Q5VYV0 432 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 REC114Q7Z4M0 266 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 DPF1Q92782 380 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 C6orf62Q9GZU0 229 aaPredicted RBP18.23■□□□□ 0.51
SNF8-217ENST00000576353 PLEKHA2Q9HB19 425 aa18.23■□□□□ 0.51
SNF8-217ENST00000576353 CCDC160A6NGH7 325 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 M0QYG6 137 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 RLN1P04808 185 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 LGALS1P09382 135 aaKnown RBP18.22■□□□□ 0.51
SNF8-217ENST00000576353 OR8U8P0C7N1 319 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 NQO2P16083 231 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 SSX9Q7RTT3 188 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 OR4A5Q8NH83 315 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 SLIRPQ9GZT3 109 aaKnown RBP18.22■□□□□ 0.51
SNF8-217ENST00000576353 BET1LQ9NYM9 111 aa18.22■□□□□ 0.51
SNF8-217ENST00000576353 A0A0G2JLM5 398 aa18.21■□□□□ 0.51
SNF8-217ENST00000576353 F2RP25116 425 aa18.21■□□□□ 0.51
SNF8-217ENST00000576353 UCP3P55916 312 aa18.21■□□□□ 0.51
SNF8-217ENST00000576353 SSBP1Q04837 148 aaKnown RBP18.21■□□□□ 0.51
SNF8-217ENST00000576353 SLC38A6Q8IZM9 456 aa18.21■□□□□ 0.51
SNF8-217ENST00000576353 ARRDC1Q8N5I2 433 aa18.21■□□□□ 0.51
SNF8-217ENST00000576353 COA4Q9NYJ1 87 aa18.21■□□□□ 0.51
SNF8-217ENST00000576353 C13orf42A0A1B0GVH6 325 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 CD3DP04234 171 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 OR9G9P0C7N8 305 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 APELAP0DMC3 54 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 TAS2R19P59542 299 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 RPL8P62917 257 aaKnown RBP18.2■□□□□ 0.5
SNF8-217ENST00000576353 IL18Q14116 193 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 POU2AF1Q16633 256 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 OR4A47Q6IF82 309 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 TMEM229BQ8NBD8 167 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 DGCR14Q96DF8 476 aaKnown RBP18.2■□□□□ 0.5
SNF8-217ENST00000576353 RSRP1Q9BUV0 290 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 TINAGL1Q9GZM7 467 aaPredicted RBP18.2■□□□□ 0.5
SNF8-217ENST00000576353 HRASLSQ9HDD0 168 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 COMMD9Q9P000 198 aa18.2■□□□□ 0.5
SNF8-217ENST00000576353 IGHV3-11P01762 117 aa18.19■□□□□ 0.5
SNF8-217ENST00000576353 DGCR2P98153 550 aa18.19■□□□□ 0.5
SNF8-217ENST00000576353 C10orf55Q5SWW7 151 aa18.19■□□□□ 0.5
SNF8-217ENST00000576353 SLC25A42Q86VD7 318 aa18.19■□□□□ 0.5
SNF8-217ENST00000576353 ADAD2Q8NCV1 583 aaKnown RBP18.19■□□□□ 0.5
SNF8-217ENST00000576353 MCFD2Q8NI22 146 aa18.19■□□□□ 0.5
SNF8-217ENST00000576353 ALX4Q9H161 411 aaPredicted RBP18.19■□□□□ 0.5
SNF8-217ENST00000576353 LINC01619G3V211 115 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 CTDSPLO15194 276 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 S1PR2O95136 353 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 HSPB1P04792 205 aaKnown RBP18.18■□□□□ 0.5
SNF8-217ENST00000576353 HLA-GP17693 338 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 RPL27AP46776 148 aaKnown RBP18.18■□□□□ 0.5
SNF8-217ENST00000576353 ERVK-16P61578 105 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 PHLDA2Q53GA4 152 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 TTC9CQ8N5M4 171 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 DMBX1Q8NFW5 382 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 SMIM4Q8WVI0 70 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 USMG5Q96IX5 58 aa18.18■□□□□ 0.5
SNF8-217ENST00000576353 NXF2Q9GZY0 626 aaKnown RBP18.18■□□□□ 0.5
SNF8-217ENST00000576353 ZMAT5Q9UDW3 170 aaKnown RBP18.18■□□□□ 0.5
SNF8-217ENST00000576353 RAB3DO95716 219 aa18.17■□□□□ 0.5
SNF8-217ENST00000576353 PRB2P02812 416 aaPredicted RBP18.17■□□□□ 0.5
SNF8-217ENST00000576353 CD74P04233 296 aa18.17■□□□□ 0.5
SNF8-217ENST00000576353 LPAR6P43657 344 aa18.17■□□□□ 0.5
SNF8-217ENST00000576353 FAM212BQ9NTI7 297 aaPredicted RBP18.17■□□□□ 0.5
SNF8-217ENST00000576353 RSL24D1Q9UHA3 163 aaKnown RBP18.17■□□□□ 0.5
SNF8-217ENST00000576353 UPK2O00526 184 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 IL6RP08887 468 aaPredicted RBP18.16■□□□□ 0.5
SNF8-217ENST00000576353 FGF2P09038 288 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 TNFSF8P32971 234 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 EGFEM1PQ0D2K5 195 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 C9orf66Q5T8R8 295 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 STEAP1BQ6NZ63 245 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 LHFPL1Q86WI0 220 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 ZNF486Q96H40 463 aaPredicted RBP18.16■□□□□ 0.5
SNF8-217ENST00000576353 FYTTD1Q96QD9 318 aaKnown RBP18.16■□□□□ 0.5
SNF8-217ENST00000576353 SLC2A9Q9NRM0 540 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 TMEM140Q9NV12 185 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 TNCP24821 2201 aa18.16■□□□□ 0.5
SNF8-217ENST00000576353 DPPA5A6NC42 116 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 TEX22C9J3V5 150 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 ZNF701M0R085 212 aaPredicted RBP18.15■□□□□ 0.5
SNF8-217ENST00000576353 ZNF735P0CB33 412 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 PGAM2P15259 253 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 HOXD3P31249 432 aaPredicted RBP18.15■□□□□ 0.5
SNF8-217ENST00000576353 MEF2DQ14814 521 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 TBC1D26Q86UD7 250 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 TERB2Q8NHR7 220 aa18.15■□□□□ 0.5
SNF8-217ENST00000576353 RBM38Q9H0Z9 239 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms