RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	SLC35D1	Q9NTN3	355 aa		11.41	□□□□□ -0.58
ABR-223	ENST00000573895	WASHC3	Q9Y3C0	194 aa		11.41	□□□□□ -0.58
ABR-223	ENST00000573895		H0YJW9	148 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	FCGR3B	O75015	233 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	IFNA21	P01568	189 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	TMEM11	P17152	192 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	BRWD1-AS2	P59051	145 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	ANKRD55	Q3KP44	614 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	FBLN7	Q53RD9	439 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	SELENOH	Q8IZQ5	122 aa	Known RBP	11.4	□□□□□ -0.58
ABR-223	ENST00000573895	CADM3	Q8N126	398 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	RBPMS	Q93062	196 aa	Known RBP	11.4	□□□□□ -0.58
ABR-223	ENST00000573895	COMMD9	Q9P000	198 aa		11.4	□□□□□ -0.58
ABR-223	ENST00000573895	PLXNB1	O43157	2135 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	HMX3	A6NHT5	357 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	DBX1	A6NMT0	343 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895		H7C2Y5	167 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	TSPAN15	O95858	294 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	HRAS	P01112	189 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	IGKV1D-33	P01593	117 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	IGKV1-33	P01594	117 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	TRAPPC2	P0DI81	140 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	TRAPPC2B	P0DI82	140 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	LGALS7	P47929	136 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	LINC00205	P59089	165 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	RRAS2	P62070	204 aa	Predicted RBP	11.39	□□□□□ -0.59
ABR-223	ENST00000573895	HES1	Q14469	280 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	TMEM268	Q5VZI3	342 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	LIN54	Q6MZP7	749 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	NDUFA11	Q86Y39	141 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	UXS1	Q8NBZ7	420 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	OR2T10	Q8NGZ9	312 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	OSR1	Q8TAX0	266 aa	Predicted RBP	11.39	□□□□□ -0.59
ABR-223	ENST00000573895	CHAC2	Q8WUX2	184 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895	FLYWCH2	Q96CP2	140 aa	Known RBP	11.39	□□□□□ -0.59
ABR-223	ENST00000573895	TMED3	Q9Y3Q3	217 aa		11.39	□□□□□ -0.59
ABR-223	ENST00000573895		A0A1B0GVG6	124 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	CD28	P10747	220 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	VDAC1	P21796	283 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	BCAP31	P51572	246 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	TMEM95	Q3KNT9	176 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	TMEM177	Q53S58	311 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	FAM219A	Q8IW50	185 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895		Q8N6K4	173 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	C5orf56	Q8N8D9	126 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	C11orf44	Q8N8P7	122 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	OR5AU1	Q8NGC0	362 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	OR8H1	Q8NGG4	311 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	LSM10	Q969L4	123 aa	Known RBP	11.38	□□□□□ -0.59
ABR-223	ENST00000573895	EAF1	Q96JC9	268 aa	Predicted RBP	11.38	□□□□□ -0.59
ABR-223	ENST00000573895	NOTCH3	Q9UM47	2321 aa		11.38	□□□□□ -0.59
ABR-223	ENST00000573895	RAMP3	O60896	148 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	CRYZL1	O95825	349 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	OPN1MW	P04001	364 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	SULT1A3	P0DMM9	295 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	SULT1A4	P0DMN0	295 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	OPN1MW2	P0DN77	364 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	OPN1MW3	P0DN78	364 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	NQO2	P16083	231 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	ERVK-16	P61578	105 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	CD83	Q01151	205 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	POU2AF1	Q16633	256 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	OR2B11	Q5JQS5	317 aa		11.37	□□□□□ -0.59
ABR-223	ENST00000573895	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.37	□□□□□ -0.59
ABR-223	ENST00000573895	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.37	□□□□□ -0.59
ABR-223	ENST00000573895	RRNAD1	Q96FB5	475 aa	Known RBP	11.37	□□□□□ -0.59
ABR-223	ENST00000573895	hCG_2014768	A0A024R1R8	64 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	SHOX	O15266	292 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	S1PR2	O95136	353 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	MOS	P00540	346 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	IGKV1-39	P01597	117 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	IGKV1D-39	P04432	117 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	SLC25A6	P12236	298 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	RPS16	P62249	146 aa	Known RBP	11.36	□□□□□ -0.59
ABR-223	ENST00000573895	LYZL2	Q7Z4W2	148 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	SLC35G3	Q8N808	338 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	OR4F17	Q8NGA8	305 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	LHFPL5	Q8TAF8	219 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	ASB13	Q8WXK3	278 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	R3HDM4	Q96D70	268 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	SEC22A	Q96IW7	307 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	OR4F4	Q96R69	305 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	TSNAX	Q99598	290 aa	Known RBP	11.36	□□□□□ -0.59
ABR-223	ENST00000573895	CITED2	Q99967	270 aa	Predicted RBP	11.36	□□□□□ -0.59
ABR-223	ENST00000573895	PRR13	Q9NZ81	148 aa		11.36	□□□□□ -0.59
ABR-223	ENST00000573895	ADARB2-AS1	A8MUL3	147 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	KRAS	P01116	189 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	IGHG2	P01859	326 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	IGKV1-16	P04430	117 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	HOXB5	P09067	269 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	CYCS	P99999	105 aa	Known RBP	11.35	□□□□□ -0.59
ABR-223	ENST00000573895	HNF4G	Q14541	408 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	C9orf152	Q5JTZ5	239 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	GGNBP1	Q5YKI7	109 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	GSG1L	Q6UXU4	331 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	H2BFWT	Q7Z2G1	175 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	RNASE11	Q8TAA1	199 aa	Known RBP	11.35	□□□□□ -0.59
ABR-223	ENST00000573895	VSTM2A	Q8TAG5	236 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	RHOV	Q96L33	236 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	SPIN2A	Q99865	258 aa		11.35	□□□□□ -0.59

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