RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 SSX9Q7RTT3 188 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 CLVS1Q8IUQ0 354 aaPredicted RBP15.55■□□□□ 0.08
NUP88-204ENST00000572290 ADAD2Q8NCV1 583 aaKnown RBP15.55■□□□□ 0.08
NUP88-204ENST00000572290 OR51H1Q8NH63 302 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 DLX4Q92988 240 aaPredicted RBP15.55■□□□□ 0.08
NUP88-204ENST00000572290 AIFM2Q9BRQ8 373 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 EXTL2Q9UBQ6 330 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 SPCS2Q15005 226 aa15.54■□□□□ 0.08
NUP88-204ENST00000572290 FXYD6Q9H0Q3 95 aa15.54■□□□□ 0.08
NUP88-204ENST00000572290 SCOCQ9UIL1 159 aa15.54■□□□□ 0.08
NUP88-204ENST00000572290 HPRT1P00492 218 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 MAS1LP35410 378 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 RPL27AP46776 148 aaKnown RBP15.53■□□□□ 0.08
NUP88-204ENST00000572290 INSL3P51460 131 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 TAS2R31P59538 309 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 TSPAN5P62079 268 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 CD300LFQ8TDQ1 290 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 RAB2BQ8WUD1 216 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 USMG5Q96IX5 58 aa15.53■□□□□ 0.08
NUP88-204ENST00000572290 RANGRFQ9HD47 186 aaPredicted RBP15.53■□□□□ 0.08
NUP88-204ENST00000572290 PGLYRP1O75594 196 aaPredicted RBP15.52■□□□□ 0.08
NUP88-204ENST00000572290 DEFA5Q01523 94 aa15.52■□□□□ 0.08
NUP88-204ENST00000572290 DEFB121Q5J5C9 76 aa15.52■□□□□ 0.08
NUP88-204ENST00000572290 CMTM1Q8IZ96 169 aa15.52■□□□□ 0.08
NUP88-204ENST00000572290 TTC9CQ8N5M4 171 aa15.52■□□□□ 0.08
NUP88-204ENST00000572290 OR4A5Q8NH83 315 aa15.52■□□□□ 0.08
NUP88-204ENST00000572290 BET1LQ9NYM9 111 aa15.52■□□□□ 0.08
NUP88-204ENST00000572290 HMX3A6NHT5 357 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 TEX22C9J3V5 150 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 GPR31O00270 319 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 TPPPO94811 219 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 RLN1P04808 185 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 NQO2P16083 231 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 ECI1P42126 302 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 RPL5P46777 297 aaKnown RBP15.51■□□□□ 0.07
NUP88-204ENST00000572290 RPL8P62917 257 aaKnown RBP15.51■□□□□ 0.07
NUP88-204ENST00000572290 POU2AF1Q16633 256 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 RNASE12Q5GAN4 147 aaKnown RBP15.51■□□□□ 0.07
NUP88-204ENST00000572290 OR4A47Q6IF82 309 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 SLC25A42Q86VD7 318 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 FYTTD1Q96QD9 318 aaKnown RBP15.51■□□□□ 0.07
NUP88-204ENST00000572290 BCL7BQ9BQE9 202 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 PLEKHA2Q9HB19 425 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 HRASLSQ9HDD0 168 aa15.51■□□□□ 0.07
NUP88-204ENST00000572290 ANKRD34BA5PLL1 514 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 RGS5O15539 181 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 S1PR2O95136 353 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 PRH1P02810 166 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 IL6RP08887 468 aaPredicted RBP15.5■□□□□ 0.07
NUP88-204ENST00000572290 HLA-GP17693 338 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 TMBIM6P55061 237 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 VAX1Q5SQQ9 334 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 LPCAT3Q6P1A2 487 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 ZNF429Q86V71 674 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 C15orf40Q8WUR7 153 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 MIXL1Q9H2W2 232 aa15.5■□□□□ 0.07
NUP88-204ENST00000572290 DPPA5A6NC42 116 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 FAM223BA6NKX1 122 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 E7EUB6 86 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 SAP30O75446 220 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 RBMXL2O75526 392 aaKnown RBP15.49■□□□□ 0.07
NUP88-204ENST00000572290 ZNF735P0CB33 412 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 ZP3P21754 424 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 F2RP25116 425 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 RHOGP84095 191 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 ZNF343Q6P1L6 599 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 FAM223AQ8IWN6 122 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 DMBX1Q8NFW5 382 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 OR52I2Q8NH67 350 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 ABHD1Q96SE0 405 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 COMMD9Q9P000 198 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 PEF1Q9UBV8 284 aaKnown RBP15.49■□□□□ 0.07
NUP88-204ENST00000572290 KLK11Q9UBX7 282 aa15.49■□□□□ 0.07
NUP88-204ENST00000572290 TRBV9A0A0B4J1U6 114 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 M0QYG6 137 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 UPK2O00526 184 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 CTDSP2O14595 271 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 NOL3O60936 208 aaKnown RBP15.48■□□□□ 0.07
NUP88-204ENST00000572290 MYOD1P15172 320 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 S100GP29377 79 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 ZNF45Q02386 682 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 ACSM6Q6P461 480 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 LAX1Q8IWV1 398 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 DGCR14Q96DF8 476 aaKnown RBP15.48■□□□□ 0.07
NUP88-204ENST00000572290 AKIP1Q9NQ31 210 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 SLC2A9Q9NRM0 540 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 TMEM140Q9NV12 185 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 ZNF257Q9Y2Q1 563 aa15.48■□□□□ 0.07
NUP88-204ENST00000572290 A0A1B0GW64 132 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 NPIPB5A8MRT5 1133 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 IFNA6P05013 189 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 LPAR6P43657 344 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 UCP3P55916 312 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 ERVK-16P61578 105 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 ATP5G2Q06055 141 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 DCTN2Q13561 401 aaKnown RBP15.47■□□□□ 0.07
NUP88-204ENST00000572290 PHLDA2Q53GA4 152 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 RNASE10Q5GAN6 216 aaKnown RBP15.47■□□□□ 0.07
NUP88-204ENST00000572290 DYNC2LI1Q8TCX1 351 aa15.47■□□□□ 0.07
NUP88-204ENST00000572290 PRR25Q96S07 402 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms