RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 IGHV3-35A0A0C4DH35 117 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 TMEM235A6NFC5 223 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 TEX22C9J3V5 150 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 TNFSF12O43508 249 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 CREBL2O60519 120 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 DIRAS3O95661 229 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 PTHLHP12272 177 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 CD36P16671 472 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 CBLN1P23435 193 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 RPL27AP46776 148 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 BRWD1-AS2P59051 145 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 HACD4Q5VWC8 232 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 Q6ZS49 121 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 TMEM61Q8N0U2 210 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 KCTD12Q96CX2 325 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF257Q9Y2Q1 563 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 MRPS7Q9Y2R9 242 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 PRELID3BQ9Y3B1 194 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
CTDNEP1-203ENST00000570385 TRDV1A0A1B0GX56 115 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 TMEM213A2RRL7 107 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 SSX5O60225 188 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 KBTBD11O94819 623 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 HLA-DQB1P01920 261 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 DTYMKP23919 212 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 ARL3P36405 182 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 RANBP1P43487 201 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 GNG2P59768 71 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 TBCEQ15813 527 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 TM4SF20Q53R12 229 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 IZUMO2Q6UXV1 221 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC25A42Q86VD7 318 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 LAX1Q8IWV1 398 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 MFSD4AQ8N468 514 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 UXS1Q8NBZ7 420 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR52B4Q8NGK2 314 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR4S2Q8NH73 311 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 IL17DQ8TAD2 202 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 TMEM167AQ8TBQ9 72 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR2A7Q96R45 310 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 CCL28Q9NRJ3 127 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC2A9Q9NRM0 540 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 NDUFB11Q9NX14 153 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 MLXQ9UH92 298 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 DAPK2Q9UIK4 370 aa6.46□□□□□ -1.38
CTDNEP1-203ENST00000570385 TRAV3A0A0B4J244 114 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 MFSD2BA6NFX1 497 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 NPIPB5A8MRT5 1133 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 CLEC3BP05452 202 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 CTXN2P0C2S0 81 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF735P0CB33 412 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 DEFA4P12838 97 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 RPA2P15927 270 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 PSMB6P28072 239 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 RPL8P62917 257 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 EIF4EBP1Q13541 118 aaPredicted RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 PMS2P11Q13670 270 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF585BQ52M93 769 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF57Q68EA5 555 aaPredicted RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 CNIH2Q6PI25 160 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 BTNL8Q6UX41 500 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 UNQ9165/PRO28630Q6UXU0 137 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC16A13Q7RTY0 426 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 GPHB5Q86YW7 130 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 PUSL1Q8N0Z8 303 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 LGALS14Q8TCE9 139 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 SECTM1Q8WVN6 248 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 HSD17B10Q99714 261 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 HRASLSQ9HDD0 168 aa6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 TECRQ9NZ01 308 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-203ENST00000570385 CGB1A6NKQ9 187 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 NOTOA8MTQ0 251 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 LGALS9O00182 355 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 SULT1C2O00338 296 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 CLEC2LP0C7M8 214 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 HLA-GP17693 338 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 PSMB9P28065 219 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 FCGR2CP31995 323 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 GPR183P32249 361 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 FXYD4P59646 89 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 ARL6IP1Q15041 203 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 FAM106AQ4KMX7 169 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR4A47Q6IF82 309 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 SPAG16Q8N0X2 631 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 GVQW1Q8N7I0 195 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 VSTM2AQ8TAG5 236 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 CENPOQ9BU64 300 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 GGTLC1Q9BX51 225 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 DCSTAMPQ9H295 470 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 TXNL4BQ9NX01 149 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 UBQLN2Q9UHD9 624 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 ANXA10Q9UJ72 324 aa6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 RRP15Q9Y3B9 282 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-203ENST00000570385 ALMS1Q8TCU4 4167 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms