RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 PTX4Q96A99 478 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 TLCD1Q96CP7 247 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 FYTTD1Q96QD9 318 aaKnown RBP4.29□□□□□ -1.72
BBS4-218ENST00000569440 OR2A7Q96R45 310 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 GPER1Q99527 375 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 TBX5Q99593 518 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 SIKE1Q9BRV8 207 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 RHPN1-AS1Q9BWJ2 59 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 FAM192AQ9GZU8 254 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 ZNF430Q9H8G1 570 aaPredicted RBP4.29□□□□□ -1.72
BBS4-218ENST00000569440 TVP23BQ9NYZ1 205 aa4.29□□□□□ -1.72
BBS4-218ENST00000569440 SAMHD1Q9Y3Z3 626 aaKnown RBP4.29□□□□□ -1.72
BBS4-218ENST00000569440 NACAE9PAV3 2078 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 TNXBP22105 4242 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 IGLV11-55A0A075B6I3 123 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 C15orf62A8K5M9 175 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 NDUFA4O00483 81 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 PRKYO43930 277 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 ZNF780AO75290 641 aaPredicted RBP4.28□□□□□ -1.72
BBS4-218ENST00000569440 IL6RP08887 468 aaPredicted RBP4.28□□□□□ -1.72
BBS4-218ENST00000569440 MT1HL1P0DM35 61 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 GTF2F2P13984 249 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 HIST1H1BP16401 226 aaKnown RBP4.28□□□□□ -1.72
BBS4-218ENST00000569440 SERPINA2P20848 420 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 MAS1LP35410 378 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 CCR9P51686 369 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 EMP1P54849 157 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 LINC00315P59091 139 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 ERVFC1-1P60608 527 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 PAFAH1B2P68402 229 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 VMA21Q3ZAQ7 101 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 FAM222AQ5U5X8 452 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 IDO2Q6ZQW0 420 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 SSX7Q7RTT5 188 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 OR51A2Q8NGJ7 313 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 IL1F10Q8WWZ1 152 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 ZNF414Q96IQ9 312 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 NSL1Q96IY1 281 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 FNDC4Q9H6D8 234 aaPredicted RBP4.28□□□□□ -1.72
BBS4-218ENST00000569440 ISG20L2Q9H9L3 353 aaKnown RBP4.28□□□□□ -1.72
BBS4-218ENST00000569440 ARL8BQ9NVJ2 186 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 PAK1IP1Q9NWT1 392 aaPredicted RBP4.28□□□□□ -1.72
BBS4-218ENST00000569440 PEX16Q9Y5Y5 336 aa4.28□□□□□ -1.72
BBS4-218ENST00000569440 PUS1Q9Y606 427 aaKnown RBP eCLIP4.28□□□□□ -1.72
BBS4-218ENST00000569440 IGHV3OR16-8A0A075B7F1 116 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 A0A087WTM6 91 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 TRAV2A0A0B4J234 112 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 IGHV7-4-1A0A0J9YVY3 117 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 SMIM9A6NGZ8 99 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 OR4C45A6NMZ5 311 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 ZNF705FA8MVS1 300 aaPredicted RBP4.27□□□□□ -1.73
BBS4-218ENST00000569440 DIRC3C9JPN6 131 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 E7EUB6 86 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 M0R1X1 148 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
BBS4-218ENST00000569440 ZNF705DP0CH99 300 aaPredicted RBP4.27□□□□□ -1.73
BBS4-218ENST00000569440 ZNF705BP0CI00 300 aaPredicted RBP4.27□□□□□ -1.73
BBS4-218ENST00000569440 RAB3AP20336 220 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 PTBP1P26599 531 aaKnown RBP eCLIP4.27□□□□□ -1.73
BBS4-218ENST00000569440 PSME3P61289 254 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 RAB32Q13637 225 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 TP53I3Q53FA7 332 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 RNASE12Q5GAN4 147 aaKnown RBP4.27□□□□□ -1.73
BBS4-218ENST00000569440 LELP1Q5T871 98 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 NXNL2Q5VZ03 156 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 SIGIRRQ6IA17 410 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 ZNF705AQ6ZN79 300 aaPredicted RBP4.27□□□□□ -1.73
BBS4-218ENST00000569440 TMEM116Q8NCL8 245 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 GIPC3Q8TF64 312 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 NSMCE2Q96MF7 247 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 UPK3BQ9BT76 320 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 C20orf24Q9BUV8 137 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 TEX12Q9BXU0 123 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 REEP1Q9H902 201 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 EFCAB1Q9HAE3 211 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 Q9N2K0 584 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 ABRACLQ9P1F3 81 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 GNG8Q9UK08 70 aa4.27□□□□□ -1.73
BBS4-218ENST00000569440 RPS10-NUDT3A0A1W2PQS6 291 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 KNCNA6PVL3 124 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 EDF1O60869 148 aaKnown RBP4.26□□□□□ -1.73
BBS4-218ENST00000569440 ACTL6BO94805 426 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 BAG2O95816 211 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 NUDT3O95989 172 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 DHFRP00374 187 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 CD5P06127 495 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 ZNF735P0CB33 412 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 DNAH10OSP0CZ25 163 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 AREGP15514 252 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 CEACAM6P40199 344 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 RAP2BP61225 183 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 ZNF85Q03923 595 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 CDK10Q15131 360 aa4.26□□□□□ -1.73
BBS4-218ENST00000569440 FAM98BQ52LJ0 330 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms