RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 REEP6Q96HR9 211 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 C2orf50Q96LR7 162 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 OR5B12Q96R08 314 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 GHRLQ9UBU3 117 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 B9D1Q9UPM9 204 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 MPC1Q9Y5U8 109 aa8.6□□□□□ -1.03
CDH3-208ENST00000569036 C5orf51A6NDU8 294 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 ZNF850A8MQ14 1090 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 ZNF705EA8MWA4 302 aaPredicted RBP8.59□□□□□ -1.03
CDH3-208ENST00000569036 M0QYG6 137 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 RAB27BO00194 218 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 MMP23AO75900 390 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 CSTBP04080 98 aaKnown RBP8.59□□□□□ -1.03
CDH3-208ENST00000569036 FABP1P07148 127 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 SPARCP09486 303 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 GLP1RP43220 463 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 GPR12P47775 334 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 EDDM3BP56851 147 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 TAS2R46P59540 309 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 POLR2GP62487 172 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH3-208ENST00000569036 PLA2G7Q13093 441 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 SMIM21Q3B7S5 101 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 SCGB2B2Q4G0G5 96 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 OR10K2Q6IF99 312 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 BTNL8Q6UX41 500 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 THNSL2Q86YJ6 484 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 CBLN2Q8IUK8 224 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 ZDHHC23Q8IYP9 409 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 CCDC54Q8NEL0 328 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 CSNK2A3Q8NEV1 391 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 OR13C3Q8NGS6 347 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 OR10AC1Q8NH08 325 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 OR4C12Q96R67 309 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 PLEKHA2Q9HB19 425 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 SRA1Q9HD15 236 aaKnown RBP8.59□□□□□ -1.03
CDH3-208ENST00000569036 TAS2R4Q9NYW5 299 aa8.59□□□□□ -1.03
CDH3-208ENST00000569036 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
CDH3-208ENST00000569036 STRAPQ9Y3F4 350 aaKnown RBP8.59□□□□□ -1.03
CDH3-208ENST00000569036 PSMD9O00233 223 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 EIF3GO75821 320 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH3-208ENST00000569036 IGLV1-47P01700 117 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 IGLV1-51P01701 117 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 FCGR3AP08637 254 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 TMEM11P17152 192 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 RPS27P42677 84 aaKnown RBP8.58□□□□□ -1.04
CDH3-208ENST00000569036 PTGFRP43088 359 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 NPBWR1P48145 328 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 GPM6AP51674 278 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 SSTP61278 116 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 QRFPP83859 136 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 EWSR1Q01844 656 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH3-208ENST00000569036 KIAA0141Q14154 515 aaPredicted RBP8.58□□□□□ -1.04
CDH3-208ENST00000569036 GFOD2Q3B7J2 385 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 ZNF529Q6P280 563 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 TMEM88Q6PEY1 159 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 ABHD12Q8N2K0 398 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 OR51A4Q8NGJ6 313 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 OR10R2Q8NGX6 335 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 ZNF596Q8TC21 504 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 SGK3Q96BR1 496 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 SLC5A7Q9GZV3 580 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 OR51I2Q9H344 312 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 FAM212BQ9NTI7 297 aaPredicted RBP8.58□□□□□ -1.04
CDH3-208ENST00000569036 GPR132Q9UNW8 380 aa8.58□□□□□ -1.04
CDH3-208ENST00000569036 APOBP04114 4563 aaKnown RBP8.58□□□□□ -1.04
CDH3-208ENST00000569036 LOC107986453A0A1B0GWG9 222 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 TMEM235A6NFC5 223 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 TMEM14DPA8MWL7 114 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 K7N7A8 449 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 TGOLN2O43493 480 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 SFTA3P0C7M3 94 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 SEC11BP0C7V7 166 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 VAMP1P23763 118 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 CEACAM3P40198 252 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 IL15RAQ13261 267 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 EIF2B1Q14232 305 aaKnown RBP8.57□□□□□ -1.04
CDH3-208ENST00000569036 HES1Q14469 280 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 HNF4GQ14541 408 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 TMEM268Q5VZI3 342 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 CCDC144NLQ6NUI1 221 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 LHFPL1Q86WI0 220 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 JAGN1Q8N5M9 183 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 ZNF491Q8N8L2 437 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 UBAC2Q8NBM4 344 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 POC1AQ8NBT0 407 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 OR56B1Q8NGI3 324 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 KCNG3Q8TAE7 436 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 EMG1Q92979 244 aaKnown RBP8.57□□□□□ -1.04
CDH3-208ENST00000569036 S100A13Q99584 98 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 ABHD6Q9BV23 337 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 PBDC1Q9BVG4 233 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 ARV1Q9H2C2 271 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 MRPL22Q9NWU5 206 aaKnown RBP8.57□□□□□ -1.04
CDH3-208ENST00000569036 SIGLEC8Q9NYZ4 499 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms