RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZNF585BQ52M93 769 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 TMEM128Q5BJH2 165 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 C11orf88Q6PI97 169 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 CCBE1Q6UXH8 406 aaPredicted RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 TMEM219Q86XT9 240 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 PDPNQ86YL7 162 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 OR52B4Q8NGK2 314 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 OR2T10Q8NGZ9 312 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 OR4S2Q8NH73 311 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 ZNF418Q8TF45 676 aaPredicted RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 SSMEM1Q8WWF3 244 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 FLYWCH2Q96CP2 140 aaKnown RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 HARBI1Q96MB7 349 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 SEC22CQ9BRL7 303 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 LIN7CQ9NUP9 197 aaKnown RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 KCNIP3Q9Y2W7 256 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 SONP18583 2426 aaKnown RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 ZNF469Q96JG9 3925 aaPredicted RBP6.16□□□□□ -1.42
SMG1-214ENST00000568038 C9orf170A2RU37 121 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 A6NDX4 124 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 DNAJC9-AS1A6NH13 148 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 NCBP2LA6PVI3 153 aaKnown RBP6.16□□□□□ -1.42
SMG1-214ENST00000568038 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
SMG1-214ENST00000568038 S1PR2O95136 353 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 SFT2D2O95562 160 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 SCGB1D2O95969 90 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 HPRT1P00492 218 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 HLA-AP01891 365 aaKnown RBP6.16□□□□□ -1.42
SMG1-214ENST00000568038 F2RL1P55085 397 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 DHODHQ02127 395 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 EBI3Q14213 229 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 TMEM187Q14656 261 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 OXA1LQ15070 435 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 MMDQ15546 238 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 DHRS7BQ6IAN0 325 aaPredicted RBP6.16□□□□□ -1.42
SMG1-214ENST00000568038 SSX9Q7RTT3 188 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 LYG2Q86SG7 212 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 TCTEX1D1Q8N7M0 179 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 OR4C13Q8NGP0 309 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 OR5R1Q8NH85 324 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 CD300LFQ8TDQ1 290 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 GLYATL2Q8WU03 294 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 GALNT14Q96FL9 552 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 MARVELD1Q9BSK0 173 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 ALX4Q9H161 411 aaPredicted RBP6.16□□□□□ -1.42
SMG1-214ENST00000568038 PITPNC1Q9UKF7 332 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 TCF19Q9Y242 345 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 TLN2Q9Y4G6 2542 aa6.16□□□□□ -1.42
SMG1-214ENST00000568038 VPS13CQ709C8 3753 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 RBFOX2O43251 390 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMG1-214ENST00000568038 B3GALNT1O75752 331 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 NUDT3O95989 172 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 DHFRP00374 187 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 KRASP01116 189 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 IGKV1-39P01597 117 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 IGLV2-23P01705 113 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 IGKV1D-39P04432 117 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 ANXA3P12429 323 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 UCP1P25874 307 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 G6PCP35575 357 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 LGALS7P47929 136 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 UBE2MP61081 183 aaKnown RBP6.15□□□□□ -1.42
SMG1-214ENST00000568038 ERVK-16P61578 105 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 DHRS2Q13268 280 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 PLGLAQ15195 96 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 PSG5Q15238 335 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 ANKRD55Q3KP44 614 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 TMEM268Q5VZI3 342 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 LIN54Q6MZP7 749 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 ZNF695Q8IW36 515 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 SELENOHQ8IZQ5 122 aaKnown RBP6.15□□□□□ -1.42
SMG1-214ENST00000568038 VKORC1L1Q8N0U8 176 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 LGI3Q8N145 548 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 Q8N6K4 173 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 UXS1Q8NBZ7 420 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 DMBX1Q8NFW5 382 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 LHFPL5Q8TAF8 219 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 OSR1Q8TAX0 266 aaPredicted RBP6.15□□□□□ -1.42
SMG1-214ENST00000568038 R3HDM4Q96D70 268 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 RBM14Q96PK6 669 aaKnown RBP6.15□□□□□ -1.42
SMG1-214ENST00000568038 CLCC1Q96S66 551 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 TSNAXQ99598 290 aaKnown RBP6.15□□□□□ -1.42
SMG1-214ENST00000568038 RNF5Q99942 180 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 SLC25A33Q9BSK2 321 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 CHIAQ9BZP6 476 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 TMEM222Q9H0R3 208 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 FBXL15Q9H469 300 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 PLEKHA2Q9HB19 425 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 ESM1Q9NQ30 184 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 COMMD9Q9P000 198 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 KIAA1456Q9P272 454 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 VPREB3Q9UKI3 123 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 POMT1Q9Y6A1 747 aa6.15□□□□□ -1.42
SMG1-214ENST00000568038 AKAP9Q99996 3911 aa6.15□□□□□ -1.43
SMG1-214ENST00000568038 NAV3Q8IVL0 2385 aa6.15□□□□□ -1.43
SMG1-214ENST00000568038 OTOGQ6ZRI0 2925 aa6.15□□□□□ -1.43
SMG1-214ENST00000568038 FN1P02751 2386 aaKnown RBP6.14□□□□□ -1.43
SMG1-214ENST00000568038 SH2D7A6NKC9 451 aaPredicted RBP6.14□□□□□ -1.43
SMG1-214ENST00000568038 RRHO14718 337 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms