RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 COX7A2LO14548 114 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ITGB1BP1O14713 200 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NCR3O14931 201 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 INE1O15225 51 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 FABP7O15540 132 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SYNGR1O43759 233 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR1I1O60431 355 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ARL6IP5O75915 188 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LYZL6O75951 148 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LDOC1O95751 146 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 DNAL4O96015 105 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CST4P01036 141 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CSTAP01040 98 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 IGKV1-5P01602 117 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 IGHV3-7P01780 117 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 PMP2P02689 132 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 IL6P05231 212 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 HLA-DQB2P05538 268 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MSMBP08118 114 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 PTNP21246 168 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MSNP26038 577 aaKnown RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 PSMB8P28062 276 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CD40LGP29965 261 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MIPP30301 263 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 AGTR1P30556 359 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 HOXA6P31267 233 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 BRS3P32247 399 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 UGT2B10P36537 528 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CA7P43166 264 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SPINT3P49223 89 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 H2BFSP57053 126 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MAP3K7CLP57077 242 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SPINK7P58062 85 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 HLA-DRB3P79483 266 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TNFAIP6P98066 277 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 FABP5Q01469 135 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SLAMF1Q13291 335 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 PDE6HQ13956 83 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 GNA13Q14344 377 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 JOSD1Q15040 202 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR4D1Q15615 310 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 GUK1Q16774 197 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LRRC26Q2I0M4 334 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ASB16-AS1Q495Z4 193 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NKAIN1Q4KMZ8 207 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 HSP90AA4PQ58FG1 418 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 RNASE10Q5GAN6 216 aaKnown RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TNFAIP8L3Q5GJ75 292 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 C6orf52Q5T4I8 152 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 GDF5OSQ5U4N7 250 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TTC33Q6PID6 262 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LCN15Q6UWW0 184 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SCGB1D4Q6XE38 83 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 Q6ZQT0 140 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ZNF826PQ6ZT77 177 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SSX8Q7RTT4 187 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ZNF550Q7Z398 422 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LRRC6Q86X45 466 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 DHFR2Q86XF0 187 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TMEM86AQ8N2M4 240 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 RPP25LQ8N5L8 163 aaKnown RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LINC00311Q8N616 119 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TMEM251Q8N6I4 163 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NATD1Q8N6N6 113 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ZNF676Q8N7Q3 588 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 Q8N814 137 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 C12orf29Q8N999 325 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ACBD4Q8NC06 268 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR1M1Q8NGA1 313 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR52R1Q8NGF1 315 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR8B3Q8NGG8 313 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR2D3Q8NGH3 330 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR13C8Q8NGS7 320 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR2T4Q8NH00 348 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR2T27Q8NH04 317 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR51H1Q8NH63 302 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR10D3Q8NH80 312 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR5K1Q8NHB7 308 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ACOT12Q8WYK0 555 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CIDECQ96AQ7 238 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CCDC127Q96BQ5 260 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LRRC45Q96CN5 670 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TLCD1Q96CP7 247 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TMA16Q96EY4 203 aaKnown RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CPNE2Q96FN4 548 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SERPINB11Q96P15 392 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ERMAPQ96PL5 475 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 OR7D2Q96RA2 312 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 HBEGFQ99075 208 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CCL13Q99616 98 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SLC50A1Q9BRV3 221 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TMEM208Q9BTX3 173 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TMEM109Q9BVC6 243 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MROQ9BYG7 248 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NKX6-2Q9C056 277 aaPredicted RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SLC22A4Q9H015 551 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NSRP1Q9H0G5 558 aaKnown RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TMEM222Q9H0R3 208 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 RAB1BQ9H0U4 201 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TRABDQ9H4I3 376 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms