RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 OPN1MW2P0DN77 364 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 OPN1MW3P0DN78 364 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 LPAR6P43657 344 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 NDPQ00604 133 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 FXYD3Q14802 87 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 PRSS8Q16651 343 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 ECSCRQ19T08 205 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 OR4A47Q6IF82 309 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 TEX38Q6PEX7 206 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 VKORC1L1Q8N0U8 176 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 PUSL1Q8N0Z8 303 aaKnown RBP9.59□□□□□ -0.87
SF3B3-208ENST00000567250 SGMS2Q8NHU3 365 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-208ENST00000567250 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 TSC22D3Q99576 134 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 PHB2Q99623 299 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 TMEM140Q9NV12 185 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 KCNIP3Q9Y2W7 256 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 CRYM-AS1A6NIL9 109 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 M0QZ24 198 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 FCN1O00602 326 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 ANXA3P12429 323 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 AKR1C2P52895 323 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 RPL8P62917 257 aaKnown RBP9.58□□□□□ -0.88
SF3B3-208ENST00000567250 SRPXP78539 464 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 DHODHQ02127 395 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 C2orf68Q2NKX9 166 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 TRIM16LQ309B1 348 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 CADM3Q8N126 398 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 GRPEL2Q8TAA5 225 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 SRSF12Q8WXF0 261 aaKnown RBP9.58□□□□□ -0.88
SF3B3-208ENST00000567250 SPIN2AQ99865 258 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 SPIN2BQ9BPZ2 258 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 RTBDNQ9BSG5 229 aaPredicted RBP9.58□□□□□ -0.88
SF3B3-208ENST00000567250 NAA60Q9H7X0 242 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 ZNF430Q9H8G1 570 aaPredicted RBP9.58□□□□□ -0.88
SF3B3-208ENST00000567250 LINC00527Q9UJ94 153 aa9.58□□□□□ -0.88
SF3B3-208ENST00000567250 LINC00854A0A1B0GVQ3 168 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 A0A1W2PN81 502 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 LINC01548A6NM66 108 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 LYRM1O43325 122 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 SNAPC5O75971 98 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 KRASP01116 189 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 ELANEP08246 267 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 OR5AC1P0C628 307 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 UCP1P25874 307 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 CHRNA7P36544 502 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 ZNF585BQ52M93 769 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 AKIRIN2Q53H80 203 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 CXorf66Q5JRM2 361 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-208ENST00000567250 KHDC1LQ5JSQ8 128 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 THOC7Q6I9Y2 204 aaKnown RBP9.57□□□□□ -0.88
SF3B3-208ENST00000567250 UNQ5815/PRO19632Q6UWF5 114 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 TMED4Q7Z7H5 227 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 ZNF329Q86UD4 541 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 CENPSQ8N2Z9 138 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 OR5M8Q8NGP6 311 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 RNASE11Q8TAA1 199 aaKnown RBP9.57□□□□□ -0.88
SF3B3-208ENST00000567250 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 FAM103A1Q9BTL3 118 aaKnown RBP9.57□□□□□ -0.88
SF3B3-208ENST00000567250 COMMD5Q9GZQ3 224 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 TMEM222Q9H0R3 208 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 FOXA2Q9Y261 457 aaPredicted RBP9.57□□□□□ -0.88
SF3B3-208ENST00000567250 VSIG4Q9Y279 399 aa9.57□□□□□ -0.88
SF3B3-208ENST00000567250 TCRBV4S1A1TA0A5B7 111 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 ARPC1BO15143 372 aaKnown RBP9.56□□□□□ -0.88
SF3B3-208ENST00000567250 UPK1BO75841 260 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 NDUFB6O95139 128 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 IGHG4P01861 327 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 CD28P10747 220 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 AKR1C4P17516 323 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 HLA-GP17693 338 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 G6PCP35575 357 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 RPL27AP46776 148 aaKnown RBP9.56□□□□□ -0.88
SF3B3-208ENST00000567250 KRTAP10-3P60369 221 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 UBE2MP61081 183 aaKnown RBP9.56□□□□□ -0.88
SF3B3-208ENST00000567250 CFHR3Q02985 330 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 FOXE3Q13461 319 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 TMEM128Q5BJH2 165 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 MZT2BQ6NZ67 158 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 TMEM65Q6PI78 240 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 H2BFWTQ7Z2G1 175 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 LFNGQ8NES3 379 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 GALNT14Q96FL9 552 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 FKBP11Q9NYL4 201 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 FBXO7Q9Y3I1 522 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 TSSC4Q9Y5U2 329 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-208ENST00000567250 WSB1Q9Y6I7 421 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 ANK2Q01484 3957 aa9.56□□□□□ -0.88
SF3B3-208ENST00000567250 PLXNB1O43157 2135 aa9.55□□□□□ -0.88
SF3B3-208ENST00000567250 G3V318 75 aa9.55□□□□□ -0.88
SF3B3-208ENST00000567250 H3BUA1 57 aa9.55□□□□□ -0.88
SF3B3-208ENST00000567250 UPK2O00526 184 aa9.55□□□□□ -0.88
SF3B3-208ENST00000567250 PPIFP30405 207 aaKnown RBP9.55□□□□□ -0.88
SF3B3-208ENST00000567250 SLC6A1P30531 599 aa9.55□□□□□ -0.88
SF3B3-208ENST00000567250 CCR6P51684 374 aa9.55□□□□□ -0.88
SF3B3-208ENST00000567250 SSBP2P81877 361 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms