RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 LOXL1Q08397 574 aaPredicted RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 IL15RAQ13261 267 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 BTN1A1Q13410 526 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 IAH1Q2TAA2 248 aaPredicted RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 AKR1C8PQ5T2L2 129 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 GFI1BQ5VTD9 330 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 C5orf46Q6UWT4 87 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 CYHR1Q6ZMK1 362 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 TIFABQ6ZNK6 161 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 GOLT1AQ6ZVE7 132 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 GRINAQ7Z429 371 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 OOSP2Q86WS3 158 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 C11orf42Q8N5U0 333 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 EIF4E3Q8N5X7 224 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 OR52L1Q8NGH7 329 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 GNPDA2Q8TDQ7 276 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 TRIB3Q96RU7 358 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 KLF6Q99612 283 aaPredicted RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 AIF1LQ9BQI0 150 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 CHCHD7Q9BUK0 85 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 MIXL1Q9H2W2 232 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 TNFRSF19Q9NS68 423 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNRD1Q9P1U0 126 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF492Q9P255 531 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 DHCR7Q9UBM7 475 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 RSL24D1Q9UHA3 163 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 PYCARDQ9ULZ3 195 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 SLC35A3Q9Y2D2 325 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 COQ4Q9Y3A0 265 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF318Q5VUA4 2279 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 CDC42BPBQ9Y5S2 1711 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 GTF3C1Q12789 2109 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 TDRD6O60522 2096 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 SBF1O95248 1867 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CFAP47Q6ZTR5 3102 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 KMT2EQ8IZD2 1858 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CRB1P82279 1406 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CARMIL3Q8ND23 1372 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 LAMA3Q16787 3333 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CEP152O94986 1710 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 KIF1AQ12756 1690 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 hCG_1818297A0A087WSY0 165 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 TRAV26-2A0A0B4J265 109 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 VPS37CA5D8V6 355 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 A8MT66 165 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 BCL2L11O43521 198 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 GSTZ1O43708 216 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 MFSD11O43934 449 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 MT-CO2P00403 227 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 IGLV1-47P01700 117 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 OPN1SWP03999 348 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 SERPINE1P05121 402 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 ERP29P30040 261 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 OR10J1P30954 320 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 DAPP51397 102 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 HSPE1P61604 102 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 RHOBP62745 196 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 GNA12Q03113 381 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 BSPH1Q075Z2 132 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 GRK1Q15835 563 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF678Q5SXM1 525 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CYB5R2Q6BCY4 276 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 MORN3Q6PF18 240 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 PHF13Q86YI8 300 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 UMODL1-AS1Q8N2C9 162 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 FAM24BQ8N5W8 94 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 KRTCAP2Q8N6L1 136 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 C15orf56Q8N910 161 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM35BQ8NCS4 154 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 OR8B12Q8NGG6 310 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 RAB2BQ8WUD1 216 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CT55Q8WUE5 264 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 ITLN2Q8WWU7 325 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 ACOT12Q8WYK0 555 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 LZICQ8WZA0 190 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 NARS2Q96I59 477 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 FAM210BQ96KR6 192 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 GPER1Q99527 375 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 ALX4Q9H161 411 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 PRO3102Q9H379 93 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 CELA1Q9UNI1 258 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM14AQ9Y6G1 99 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 PRUNE2Q8WUY3 3088 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 TRPM7Q96QT4 1865 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 SCN4AP35499 1836 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 COL18A1P39060 1754 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF292O60281 2723 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 DOCK8Q8NF50 2099 aa2.26□□□□□ -2.05
HERPUD1-211ENST00000566550 PIK3C2GO75747 1445 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 XRN1Q8IZH2 1706 aaKnown RBP2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 ARHGEF10O15013 1369 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 IGHV1-3A0A0C4DH29 117 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 TRAPPC13A5PLN9 417 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 MAP1LC3B2A6NCE7 125 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 A6NED7 52 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 OR5H14A6NHG9 310 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 K7ERS5 55 aa2.25□□□□□ -2.05
HERPUD1-211ENST00000566550 LY6G6DO95868 133 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms