RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
SPG7-213ENST00000566221 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
SPG7-213ENST00000566221 TET2Q6N021 2002 aaPredicted RBP11.8□□□□□ -0.52
SPG7-213ENST00000566221 DBX1A6NMT0 343 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 GPR137BO60478 399 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 CCNKO75909 580 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
SPG7-213ENST00000566221 AKR1C2P52895 323 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 F2RL1P55085 397 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
SPG7-213ENST00000566221 UBA52P62987 128 aaKnown RBP11.79□□□□□ -0.52
SPG7-213ENST00000566221 PLGLAQ15195 96 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 FCN2Q15485 313 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 ZNF695Q8IW36 515 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 FAM71E2Q8N5Q1 922 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 TEX45Q8NA69 505 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 LHFPL5Q8TAF8 219 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 SEC22AQ96IW7 307 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 PLSCR3Q9NRY6 295 aa11.79□□□□□ -0.52
SPG7-213ENST00000566221 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
SPG7-213ENST00000566221 ATRQ13535 2644 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 SRRM4A7MD48 611 aaKnown RBP11.78□□□□□ -0.52
SPG7-213ENST00000566221 KBTBD11O94819 623 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 KRASP01116 189 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 IFNA21P01568 189 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 G6PCP35575 357 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 CYCSP99999 105 aaKnown RBP11.78□□□□□ -0.52
SPG7-213ENST00000566221 C5orf64Q2M2E5 130 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 ANKRD55Q3KP44 614 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 SSX9Q7RTT3 188 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
SPG7-213ENST00000566221 VKORC1L1Q8N0U8 176 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 PUSL1Q8N0Z8 303 aaKnown RBP11.78□□□□□ -0.52
SPG7-213ENST00000566221 Q8N9W7 124 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 RNASE11Q8TAA1 199 aaKnown RBP11.78□□□□□ -0.52
SPG7-213ENST00000566221 FBXL15Q9H469 300 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 BET1LQ9NYM9 111 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 PRR13Q9NZ81 148 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 MGAT4CQ9UBM8 478 aa11.78□□□□□ -0.52
SPG7-213ENST00000566221 TRIM77I1YAP6 450 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 OR2A4O95047 310 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 GIPP09681 153 aaPredicted RBP11.77□□□□□ -0.53
SPG7-213ENST00000566221 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.53
SPG7-213ENST00000566221 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 H2BFWTQ7Z2G1 175 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 FAM219AQ8IW50 185 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 TCTE3Q8IZS6 198 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 SLC35G3Q8N808 338 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 UXS1Q8NBZ7 420 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 OR11H7Q8NGC8 314 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 OR4A5Q8NH83 315 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 RRNAD1Q96FB5 475 aaKnown RBP11.77□□□□□ -0.53
SPG7-213ENST00000566221 OR2A7Q96R45 310 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 RASL11BQ9BPW5 248 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 ZNF436Q9C0F3 470 aaPredicted RBP11.77□□□□□ -0.53
SPG7-213ENST00000566221 NPFFR1Q9GZQ6 430 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 SIGLEC9Q9Y336 463 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 CUBNO60494 3623 aa11.77□□□□□ -0.53
SPG7-213ENST00000566221 IGKV1-5P01602 117 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 HLA-DRB1P01911 266 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 CRYGBP07316 175 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 FGF2P09038 288 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 RAP2BP61225 183 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
SPG7-213ENST00000566221 RANBP3Q9H6Z4 567 aaPredicted RBP11.76□□□□□ -0.53
SPG7-213ENST00000566221 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
SPG7-213ENST00000566221 FAM181BA6NEQ2 426 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 SNAPC5O75971 98 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 AMY1AP04745 511 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 P0C879 139 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 CXCL3P19876 107 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 VDAC1P21796 283 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 GSG1LQ6UXU4 331 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
SPG7-213ENST00000566221 UPK2O00526 184 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 GOSR2O14653 212 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 CRYBA1P05813 215 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
SPG7-213ENST00000566221 SLC25A6P12236 298 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
SPG7-213ENST00000566221 CD83Q01151 205 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 PRSS8Q16651 343 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 NMSQ5H8A3 153 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 LYZL2Q7Z4W2 148 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
SPG7-213ENST00000566221 ZNF430Q9H8G1 570 aaPredicted RBP11.74□□□□□ -0.53
SPG7-213ENST00000566221 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms