RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ZNF146Q15072 292 aa11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 OR10AG1Q8NH19 301 aa11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 ITLN2Q8WWU7 325 aaPredicted RBP11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 Q96M66 194 aa11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 RPL39P5Q59GN2 51 aa11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 SSBP3Q9BWW4 388 aaPredicted RBP11.6□□□□□ -0.55
CX3CL1-204ENST00000565912 EMP1P54849 157 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 C12orf54Q6X4T0 127 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 LINC00305Q7Z4B0 112 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 C4orf51C9J302 202 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 WISP3O95389 354 aaPredicted RBP11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 FOLR2P14207 255 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 FAM27E3Q08E93 113 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 DRAM1Q8N682 238 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 DNASE2BQ8WZ79 361 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 TRBV5-7A0A0A0MS05 114 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 RRHO14718 337 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 KLF4O43474 513 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 CACNG7P62955 275 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 G6PC2Q9NQR9 355 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 SLC25A38Q96DW6 304 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 TMEM101Q96IK0 257 aa11.59□□□□□ -0.55
CX3CL1-204ENST00000565912 ZNF660Q6AZW8 331 aaPredicted RBP11.58□□□□□ -0.55
CX3CL1-204ENST00000565912 SLC25A34Q6PIV7 304 aa11.58□□□□□ -0.55
CX3CL1-204ENST00000565912 DNAL4O96015 105 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 HLA-DRB1P01911 266 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 C5orf66Q9H5L9 145 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 TIAF1O95411 115 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 HTN3P15516 51 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 RND3P61587 244 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 RPS11P62280 158 aaKnown RBP eCLIP11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 FAM209AQ5JX71 171 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 UNQ9370/PRO34162Q6UXP9 181 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 MRPL32Q9BYC8 188 aaKnown RBP11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 LINC00470Q9BZP3 86 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 ICAM4Q14773 271 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM30BQ3MIR4 351 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 PAPPA-AS1Q5QFB9 102 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 TNFRSF18Q9Y5U5 241 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 M0R381 172 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 SOD3P08294 240 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 Q6ZT83 130 aa11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 SCARF2Q96GP6 870 aaPredicted RBP11.58□□□□□ -0.56
CX3CL1-204ENST00000565912 A0A1W2PRX2 142 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 CD69Q07108 199 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 SMIM8Q96KF7 97 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 PUSL1Q8N0Z8 303 aaKnown RBP11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 CLDND2Q8NHS1 167 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 NMBP08949 121 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 PPP1R32Q7Z5V6 425 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 ATOH7Q8N100 152 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM54Q969K7 222 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 SPSB2Q99619 263 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 FOXD3Q9UJU5 478 aaPredicted RBP11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 RP1P56715 2156 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 CASP8AP2Q9UKL3 1982 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 IGKV1D-42A0A075B6H8 117 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 BIVMQ86UB2 503 aa11.57□□□□□ -0.56
CX3CL1-204ENST00000565912 GREM1O60565 184 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 IFITM3Q01628 133 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 WFIKKN1Q96NZ8 548 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 AQP10Q96PS8 301 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 TRAV24A0A0B4J272 114 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 PIN1P1O15428 100 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 RFPL3SP0C7P2 107 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 GCHFRP30047 84 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 RSPO4Q2I0M5 234 aaPredicted RBP11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 DUX3Q96PT4 197 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM160Q9NX00 188 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 UQCR10Q9UDW1 63 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 FBXL7Q9UJT9 491 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 IGKV1D-33P01593 117 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 IGKV1-33P01594 117 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 CELA3AP09093 270 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM187Q14656 261 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 FAM201AQ5SY85 155 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 C10orf128Q5T292 105 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 CYP2G1PQ6ZSU1 146 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 GRIFINA4D1Z8 144 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 GCM2O75603 506 aaPredicted RBP11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 ZNF638Q14966 1978 aaKnown RBP11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 EGR1P18146 543 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 TIMM23BQ5SRD1 257 aa11.56□□□□□ -0.56
CX3CL1-204ENST00000565912 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
CX3CL1-204ENST00000565912 FAM181AQ8N9Y4 354 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms