RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PLEKHA2Q9HB19 425 aa11.98□□□□□ -0.49
COMMD4-212ENST00000565517 CTDSPLO15194 276 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 IFNA6P05013 189 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 NQO2P16083 231 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-212ENST00000565517 RNASE10Q5GAN6 216 aaKnown RBP11.97□□□□□ -0.49
COMMD4-212ENST00000565517 ARRDC1Q8N5I2 433 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 TMEM229BQ8NBD8 167 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 OR5T1Q8NG75 326 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 OR51H1Q8NH63 302 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 OR4A5Q8NH83 315 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 PHB2Q99623 299 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 RSRP1Q9BUV0 290 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 BET1LQ9NYM9 111 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 COMMD9Q9P000 198 aa11.97□□□□□ -0.49
COMMD4-212ENST00000565517 M0QYG6 137 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 WIPF1O43516 503 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 TRGV3P03979 118 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 FGF2P09038 288 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
COMMD4-212ENST00000565517 OR8U8P0C7N1 319 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 F2RP25116 425 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 S100GP29377 79 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 TPPP2P59282 170 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 TAS2R19P59542 299 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 ZNF616Q08AN1 781 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 RNASE12Q5GAN4 147 aaKnown RBP11.96□□□□□ -0.49
COMMD4-212ENST00000565517 REC114Q7Z4M0 266 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 SLC38A6Q8IZM9 456 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 CADM3Q8N126 398 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 OR1N2Q8NGR9 330 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 CASTOR1Q8WTX7 329 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 DGCR14Q96DF8 476 aaKnown RBP11.96□□□□□ -0.49
COMMD4-212ENST00000565517 MS4A10Q96PG2 267 aa11.96□□□□□ -0.49
COMMD4-212ENST00000565517 C6orf62Q9GZU0 229 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-212ENST00000565517 FAM212BQ9NTI7 297 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-212ENST00000565517 A0A0G2JLM5 398 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF701M0R085 212 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-212ENST00000565517 CD74P04233 296 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 CD3DP04234 171 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 RLN1P04808 185 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-212ENST00000565517 OR9G9P0C7N8 305 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 DGCR2P98153 550 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 IL18Q14116 193 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 FOXB2Q5VYV0 432 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 OR4A47Q6IF82 309 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 LHFPL1Q86WI0 220 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
COMMD4-212ENST00000565517 MCFD2Q8NI22 146 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 OR5B12Q96R08 314 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 TINAGL1Q9GZM7 467 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-212ENST00000565517 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
COMMD4-212ENST00000565517 CCDC160A6NGH7 325 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 MPPED1O15442 326 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 HSPB1P04792 205 aaKnown RBP11.94□□□□□ -0.5
COMMD4-212ENST00000565517 TNFSF8P32971 234 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
COMMD4-212ENST00000565517 RAB25P57735 213 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 RPL8P62917 257 aaKnown RBP11.94□□□□□ -0.5
COMMD4-212ENST00000565517 SSX9Q7RTT3 188 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 SLC25A42Q86VD7 318 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 TTC9CQ8N5M4 171 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 DPF1Q92782 380 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF486Q96H40 463 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-212ENST00000565517 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 SOSTQ9BQB4 213 aa11.94□□□□□ -0.5
COMMD4-212ENST00000565517 RSL24D1Q9UHA3 163 aaKnown RBP11.94□□□□□ -0.5
COMMD4-212ENST00000565517 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 LINC01619G3V211 115 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 UPK2O00526 184 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 GSTZ1O43708 216 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-212ENST00000565517 S1PR2O95136 353 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 RAB3DO95716 219 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 HLA-GP17693 338 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 EGFEM1PQ0D2K5 195 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 ZNF585BQ52M93 769 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 STEAP1BQ6NZ63 245 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 DMBX1Q8NFW5 382 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 TERB2Q8NHR7 220 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 HRASLSQ9HDD0 168 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 COA4Q9NYJ1 87 aa11.93□□□□□ -0.5
COMMD4-212ENST00000565517 TEX22C9J3V5 150 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 E7EUB6 86 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 IGHV3-11P01762 117 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 APELAP0DMC3 54 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 PTBP1P26599 531 aaKnown RBP eCLIP11.92□□□□□ -0.5
COMMD4-212ENST00000565517 LPAR6P43657 344 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 ERVK-16P61578 105 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 RND3P61587 244 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 MEF2DQ14814 521 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 TBC1D26Q86UD7 250 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 ALX4Q9H161 411 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-212ENST00000565517 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
COMMD4-212ENST00000565517 TMEM140Q9NV12 185 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms