RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ANKRD36BP1Q96IX9 119 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TRNT1Q96Q11 434 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 TIPINQ9BVW5 301 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TCEAL2Q9H3H9 227 aaPredicted RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 METTL8Q9H825 291 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 CISHQ9NSE2 258 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TBL2Q9Y4P3 447 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 GMEB1Q9Y692 573 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 HSPE1-MOB4S4R3N1 261 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 PIEZO2Q9H5I5 2752 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 AKAP9Q99996 3911 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 MYO18BQ8IUG5 2567 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 HECTD1Q9ULT8 2610 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 KNTC1P50748 2209 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 LAMA4Q16363 1823 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 COL12A1Q99715 3063 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 KMT2EQ8IZD2 1858 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 UTP20O75691 2785 aaKnown RBP1.3□□□□□ -2.2
PALB2-203ENST00000565038 ATG2AQ2TAZ0 1938 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 KALRNO60229 2985 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 ZNF462Q96JM2 2506 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 GOLGA4Q13439 2230 aaKnown RBP1.3□□□□□ -2.2
PALB2-203ENST00000565038 ASCC3Q8N3C0 2202 aaKnown RBP1.3□□□□□ -2.2
PALB2-203ENST00000565038 LOC400499M0QZD8 3231 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 TENM4Q6N022 2769 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 A0A1B0GTI1 187 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 PVALEFA0A1B0GWK0 134 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR5H14A6NHG9 310 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 B4DEV8 164 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 C10orf142B7Z368 130 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 C9J4A7 227 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 C8orf87E5RJ46 101 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 CETN3O15182 167 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 FGF16O43320 207 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 BRI3O95415 125 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 GPR75O95800 540 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 PSMA1P25786 263 aaKnown RBP1.3□□□□□ -2.2
PALB2-203ENST00000565038 GRPRP30550 384 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 EVI2BP34910 448 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 CD151P48509 253 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 GABARAPL2P60520 117 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 RAB8AP61006 207 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 SKP1P63208 163 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 TMEM249Q2WGJ8 235 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 ZCWPW2Q504Y3 356 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 PYCR3Q53H96 274 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 RBM48Q5RL73 367 aaKnown RBP1.3□□□□□ -2.2
PALB2-203ENST00000565038 NIPAL1Q6NVV3 410 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 XKRXQ6PP77 449 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 Q6ZRU5 148 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 DEFB106AQ8N104 65 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 TMEM86AQ8N2M4 240 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR11G2Q8NGC1 345 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR5D18Q8NGL1 313 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR11L1Q8NGX0 322 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 DYNC2LI1Q8TCX1 351 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 DTD1Q8TEA8 209 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 DDI1Q8WTU0 396 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 FAM210AQ96ND0 272 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 TXNDC17Q9BRA2 123 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 C7orf50Q9BRJ6 194 aaKnown RBP1.3□□□□□ -2.2
PALB2-203ENST00000565038 EBPLQ9BY08 206 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR51E2Q9H255 320 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR52A5Q9H2C5 316 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 C1orf109Q9NX04 203 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 FBXL12Q9NXK8 326 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 OR51B4Q9Y5P0 310 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 APC2O95996 2303 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 ZFHX3Q15911 3703 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 MYOFQ9NZM1 2061 aa1.3□□□□□ -2.2
PALB2-203ENST00000565038 TANC1Q9C0D5 1861 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 UNC79Q9P2D8 2635 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 MYH6P13533 1939 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 FLNCQ14315 2725 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 A0A0D9SEW6 157 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 F5H5T6 163 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 F8VZ95 297 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 KLRC4-KLRK1H3BQV0 150 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 J3QLI3 93 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 TP53I11O14683 189 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 LIN7AO14910 233 aaPredicted RBP1.29□□□□□ -2.2
PALB2-203ENST00000565038 TCF21O43680 179 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 CALUO43852 315 aaPredicted RBP1.29□□□□□ -2.2
PALB2-203ENST00000565038 SH2D1AO60880 128 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 ADAP1O75689 374 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 YEATS4O95619 227 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 OR12D1P0DN82 309 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 F8A1P23610 371 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 CA5AP35218 305 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 ZNF140P52738 457 aaPredicted RBP1.29□□□□□ -2.2
PALB2-203ENST00000565038 DLX6P56179 175 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 SKP2Q13309 424 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 APOFQ13790 326 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 NUMA1Q14980 2115 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 TAC4Q86UU9 113 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 DOLPP1Q86YN1 238 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 SLC13A5Q86YT5 568 aaPredicted RBP1.29□□□□□ -2.2
PALB2-203ENST00000565038 FUNDC1Q8IVP5 155 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 ZIC4Q8N9L1 334 aa1.29□□□□□ -2.2
PALB2-203ENST00000565038 ACBD4Q8NC06 268 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms