RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 M0QYG6 137 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 GSTZ1O43708 216 aaPredicted RBP10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 LY86O95711 162 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 CD74P04233 296 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 CD3DP04234 171 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 CRYGBP07316 175 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 GNRHRP30968 328 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 S100A5P33763 92 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 TSPAN5P62079 268 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 SSBP2P81877 361 aaPredicted RBP10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 VMA21Q3ZAQ7 101 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 RNASE10Q5GAN6 216 aaKnown RBP10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 ZNF818PQ6ZRF7 136 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 MFSD4AQ8N468 514 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 TCTEX1D2Q8WW35 142 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 BORCS5Q969J3 196 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 GPHA2Q96T91 129 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 TINAGL1Q9GZM7 467 aaPredicted RBP10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 FXYD6Q9H0Q3 95 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 V9GYH0 126 aa10.55□□□□□ -0.72
VPS9D1-204ENST00000565023 TNCP24821 2201 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 ANKRD34BA5PLL1 514 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 OVOL1O14753 267 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 MPPED1O15442 326 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 TNFSF12O43508 249 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 BRWD1-AS2P59051 145 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 TAS2R19P59542 299 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 RUNX1Q01196 453 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 CCDC190Q86UF4 302 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 ARRDC1Q8N5I2 433 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 POC5Q8NA72 575 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 OSR1Q8TAX0 266 aaPredicted RBP10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 COA4Q9NYJ1 87 aa10.54□□□□□ -0.72
VPS9D1-204ENST00000565023 MSGN1A6NI15 193 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 SAP30O75446 220 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 IFNA6P05013 189 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 SAA1P0DJI8 122 aaPredicted RBP10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 ETV6P41212 452 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 UCP3P55916 312 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 CD69Q07108 199 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 STEAP1BQ6NZ63 245 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 LHFPL1Q86WI0 220 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 VKORC1L1Q8N0U8 176 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 OR4D10Q8NGI6 311 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 OR6Q1Q8NGQ2 317 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 SLA2Q9H6Q3 261 aa10.53□□□□□ -0.72
VPS9D1-204ENST00000565023 C13orf42A0A1B0GVH6 325 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 A6NHS1 94 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 RBFOX2O43251 390 aaKnown RBP eCLIP10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 RAMP3O60896 148 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 RAB3DO95716 219 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 KIR2DS2P43631 304 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 UBE2KP61086 200 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF79Q15937 498 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 PRSS8Q16651 343 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 C10orf55Q5SWW7 151 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 C11orf87Q6NUJ2 197 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 SSX9Q7RTT3 188 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 TEX45Q8NA69 505 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 OR4S2Q8NH73 311 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 SRSF12Q8WXF0 261 aaKnown RBP10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 RHOVQ96L33 236 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 RSRP1Q9BUV0 290 aa10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 ZMAT5Q9UDW3 170 aaKnown RBP10.52□□□□□ -0.73
VPS9D1-204ENST00000565023 ANKRD20A5PA0PJZ0 165 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 GPR31O00270 319 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 ACTL6BO94805 426 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 PRH1P02810 166 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 HSPB1P04792 205 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF735P0CB33 412 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 CATR1Q13166 79 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 MEF2DQ14814 521 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 MRGPRG-AS1Q2M3A8 158 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 HAPLN4Q86UW8 402 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 CMTM1Q8IZ96 169 aa10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 THAP7Q9BT49 309 aaPredicted RBP10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
VPS9D1-204ENST00000565023 AKAIN1P0CW23 69 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 PYDC2Q56P42 97 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 SLC38A6Q8IZM9 456 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 OR4C16Q8NGL9 310 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 OR51H1Q8NH63 302 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 TERB2Q8NHR7 220 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 CD300LFQ8TDQ1 290 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 TRIM63Q969Q1 353 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF256Q9Y2P7 627 aaPredicted RBP10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 SORL1Q92673 2214 aa10.5□□□□□ -0.73
VPS9D1-204ENST00000565023 BIRC6Q9NR09 4857 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 HMX3A6NHT5 357 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 RLN1P04808 185 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms