RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TMEM140Q9NV12 185 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 GSKIPQ9P0R6 139 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 CACNG5Q9UF02 275 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 SOX21Q9Y651 276 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-205ENST00000564899 A0A1B0GU03 582 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 FAM90A9PA6NNJ1 464 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 SRRM4A7MD48 611 aaKnown RBP8.88□□□□□ -0.99
SF3B3-205ENST00000564899 MOSP00540 346 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 SAA1P0DJI8 122 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-205ENST00000564899 SLC25A6P12236 298 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 CD24P25063 80 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 LGALS7P47929 136 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 UBE2KP61086 200 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 RAP2BP61225 183 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 CYCSP99999 105 aaKnown RBP8.88□□□□□ -0.99
SF3B3-205ENST00000564899 SRSF4Q08170 494 aaKnown RBP8.88□□□□□ -0.99
SF3B3-205ENST00000564899 CD300CQ08708 224 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 HNF4GQ14541 408 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 SMCO1Q147U7 214 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 VMA21Q3ZAQ7 101 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 OR4A47Q6IF82 309 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 TCTE3Q8IZS6 198 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 OR2T10Q8NGZ9 312 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 OR1S1Q8NH92 325 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 WDR89Q96FK6 387 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-205ENST00000564899 RITA1Q96K30 269 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 TSNAXQ99598 290 aaKnown RBP8.88□□□□□ -0.99
SF3B3-205ENST00000564899 RNF5Q99942 180 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 NMES1Q9C002 83 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 MEGF9Q9H1U4 602 aa8.88□□□□□ -0.99
SF3B3-205ENST00000564899 SLC25A17O43808 307 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 SPDEFO95238 335 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 SCGB1D2O95969 90 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 IGLV2-23P01705 113 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 OR9G9P0C7N8 305 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 FAM106CPP0CH98 169 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 TMEM11P17152 192 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 SRP14P37108 136 aaKnown RBP8.87□□□□□ -0.99
SF3B3-205ENST00000564899 DYNLT3P51808 116 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 EBI3Q14213 229 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 MMDQ15546 238 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 Q6ZRM9 215 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 C9orf139Q6ZV77 190 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 THNSL2Q86YJ6 484 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 PUSL1Q8N0Z8 303 aaKnown RBP8.87□□□□□ -0.99
SF3B3-205ENST00000564899 BCL6BQ8N143 479 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-205ENST00000564899 OR2T35Q8NGX2 323 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 VSTM2AQ8TAG5 236 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 C22orf15Q8WYQ4 148 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 EAF1Q96JC9 268 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-205ENST00000564899 BET1LQ9NYM9 111 aa8.87□□□□□ -0.99
SF3B3-205ENST00000564899 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 MDFIC2A0A1B0GVS7 189 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 SMLR1H3BR10 107 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 UPK2O00526 184 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
SF3B3-205ENST00000564899 SNAPC5O75971 98 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 KBTBD11O94819 623 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 NXPH3O95157 252 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 HNF1AP20823 631 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 CNTFRP26992 372 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 OR2B8PP59922 312 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 S100A10P60903 97 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 PSG5Q15238 335 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 LRRC37A5PQ49AS3 106 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 FBLN7Q53RD9 439 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 Q8N6K4 173 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 OR4D5Q8NGN0 318 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 OR4A16Q8NH70 328 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 OR4A5Q8NH83 315 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 PPP1R1CQ8WVI7 109 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-205ENST00000564899 COA4Q9NYJ1 87 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 KIAA1456Q9P272 454 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 NSG2Q9Y328 171 aa8.86□□□□□ -0.99
SF3B3-205ENST00000564899 C15orf61A6NNL5 157 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 RRHO14718 337 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 NBR2O15453 112 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 PITX3O75364 302 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-205ENST00000564899 NKX2-1P43699 371 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-205ENST00000564899 RELBQ01201 579 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 IL15RAQ13261 267 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 RAB32Q13637 225 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 PLGLAQ15195 96 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 AANATQ16613 207 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 FOXRED2Q8IWF2 684 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 TEX45Q8NA69 505 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 TMEM167AQ8TBQ9 72 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 SSX3Q99909 188 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 QTRT1Q9BXR0 403 aaKnown RBP8.85□□□□□ -0.99
SF3B3-205ENST00000564899 FBXL15Q9H469 300 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 ZFP57Q9NU63 452 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 METTL1Q9UBP6 276 aaKnown RBP8.85□□□□□ -0.99
SF3B3-205ENST00000564899 PRNDQ9UKY0 176 aa8.85□□□□□ -0.99
SF3B3-205ENST00000564899 LSM5Q9Y4Y9 91 aaKnown RBP8.85□□□□□ -0.99
SF3B3-205ENST00000564899 VWFP04275 2813 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms