RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 APH1AQ96BI3 265 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FAM122AQ96E09 287 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 SEPSECSQ9HD40 501 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 PDE6DO43924 150 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FCGR3BO75015 233 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MRPS11P82912 194 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 RCHY1Q96PM5 261 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 UHRF2Q96PU4 802 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 NAT8BQ9UHF3 227 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 DIRC3C9JPN6 131 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FOXL1Q12952 345 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MRPL54Q6P161 138 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ZNF645Q8N7E2 425 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TXN2Q99757 166 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 RNASE7Q9H1E1 156 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 METRNQ9UJH8 293 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TRAV3A0A0B4J244 114 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 YPEL1O60688 119 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 CHRNB4P30926 498 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 HTD2P86397 168 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 STPG4Q8N801 248 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ST6GALNAC3Q8NDV1 305 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 YPEL2Q96QA6 119 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 GNB4Q9HAV0 340 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MRPS18CQ9Y3D5 142 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 J3QT63 122 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ATP6V1FQ16864 119 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 Q8N7P7 452 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 NHLRC2Q8NBF2 726 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MS4A5Q9H3V2 200 aa17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TBL2Q9Y4P3 447 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3B-206ENST00000564844 Q6ZR03 302 aa17.08■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MDP1Q86V88 176 aa17.08■□□□□ 0.33
MAP1LC3B-206ENST00000564844 SAP25Q8TEE9 199 aa17.08■□□□□ 0.33
MAP1LC3B-206ENST00000564844 DNPH1O43598 174 aa17.08■□□□□ 0.32
MAP1LC3B-206ENST00000564844 CA1P00915 261 aaPredicted RBP17.08■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SPATA45Q537H7 98 aa17.08■□□□□ 0.32
MAP1LC3B-206ENST00000564844 LCN12Q6JVE5 192 aa17.08■□□□□ 0.32
MAP1LC3B-206ENST00000564844 WDR54Q9H977 334 aa17.08■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SERTAD4Q9NUC0 356 aa17.08■□□□□ 0.32
MAP1LC3B-206ENST00000564844 RNF212BA8MTL3 300 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TRBV6-6A0A0A6YYG2 114 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR5B21A6NL26 309 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 FAM90A26D6RGX4 464 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 HAND1O96004 215 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 HINT1P49773 126 aaPredicted RBP17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 GFRA1P56159 465 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 Q6ZN92 141 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 GCM1Q9NP62 436 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OBP2BQ9NPH6 170 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 M0QZK8 103 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MYOD1P15172 320 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 CATR1Q13166 79 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TEX43Q6ZNM6 134 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR4P4Q8NGL7 312 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 KCNIP2Q9NS61 270 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TP73-AS1Q9UF72 201 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MPC1Q9Y5U8 109 aa17.07■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SPENQ96T58 3664 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PRAMEF5Q5TYX0 476 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PRAMEF6Q5VXH4 476 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TREML4Q6UXN2 200 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MMD2Q8IY49 270 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 DUSP23Q9BVJ7 150 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MGAQ8IWI9 3026 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 CGAP01215 116 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 GATA2P23769 480 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 COMPP49747 757 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR2M7Q8NG81 312 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MGST2Q99735 147 aa17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PARD6GQ9BYG4 376 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PLGLB1Q02325 96 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SPEM1Q8N4L4 309 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 LEAP2Q969E1 77 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 STARD4Q96DR4 205 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 ZPBPQ9BS86 351 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 IL6RP08887 468 aaPredicted RBP17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PPP1R32Q7Z5V6 425 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TMPRSS2O15393 492 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SUMO1P63165 101 aaKnown RBP17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 GCNT2Q8N0V5 402 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TMEM105Q8N8V8 129 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 RTL8AQ9BWD3 113 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 NRN1Q9NPD7 142 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 WDR83OSQ9Y284 106 aa17.05■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PKDREJQ9NTG1 2253 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PCNX1Q96RV3 2341 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 ZNF253O75346 499 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MGST1P10620 155 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR13A1Q8NGR1 328 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 C20orf144Q9BQM9 153 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 LOXL2Q9Y4K0 774 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TET2Q6N021 2002 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 AHRRA9YTQ3 701 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 CRYBB3P26998 211 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 UBE2NP61088 152 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 CLEC2AQ6UVW9 174 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 KMT2EQ8IZD2 1858 aa17.04■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PIGBOS1A0A0B4J2F0 54 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR10J4P0C629 311 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms