RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 METTL1Q9UBP6 276 aaKnown RBP10.28□□□□□ -0.76
CLK3-214ENST00000564096 TCF19Q9Y242 345 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 MOB4Q9Y3A3 225 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 WNK2Q9Y3S1 2297 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 MYO9AB2RTY4 2548 aa10.28□□□□□ -0.76
CLK3-214ENST00000564096 MPTX1A8MV57 137 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 H3BUX3 64 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 M0QZK8 103 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 UPK2O00526 184 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 RRHO14718 337 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 MED6O75586 246 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 NDUFA3O95167 84 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 IGLV2-23P01705 113 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 PVALBP20472 110 aaPredicted RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 PAX6P26367 422 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 OR2B8PP59922 312 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 RPL8P62917 257 aaKnown RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 HNF4GQ14541 408 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 PSG5Q15238 335 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 DEFB112Q30KQ8 113 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 C16orf82Q7Z2V1 217 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 MRPL41Q8IXM3 137 aaKnown RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 MMD2Q8IY49 270 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 Q8N6K4 173 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 NPBQ8NG41 125 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 TMEM167AQ8TBQ9 72 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 SSMEM1Q8WWF3 244 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 FYTTD1Q96QD9 318 aaKnown RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 COMMD5Q9GZQ3 224 aa10.27□□□□□ -0.77
CLK3-214ENST00000564096 RANGRFQ9HD47 186 aaPredicted RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 TEP1Q99973 2627 aaKnown RBP10.27□□□□□ -0.77
CLK3-214ENST00000564096 VPS13CQ709C8 3753 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
CLK3-214ENST00000564096 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
CLK3-214ENST00000564096 ST8SIA3O43173 380 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 OR2F2O95006 317 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 LY86O95711 162 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 LY6G6DO95868 133 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 RLN2P04090 185 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 OR9G9P0C7N8 305 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 SRD5A1P18405 259 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 CD24P25063 80 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 MAS1LP35410 378 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 RELBQ01201 579 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 ZNF429Q86V71 674 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 PPP1R27Q86WC6 154 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 OR5B3Q8NH48 314 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 OR52E5Q8NH55 327 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 THAP6Q8TBB0 222 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 PPP1R1CQ8WVI7 109 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 C22orf15Q8WYQ4 148 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 POMT1Q9Y6A1 747 aa10.26□□□□□ -0.77
CLK3-214ENST00000564096 FLNAP21333 2647 aaKnown RBP10.26□□□□□ -0.77
CLK3-214ENST00000564096 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 MDFIC2A0A1B0GVS7 189 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 FGF16O43320 207 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 PITX3O75364 302 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 IFNA17P01571 189 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 PSMB6P28072 239 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 HOXA1P49639 335 aaPredicted RBP10.25□□□□□ -0.77
CLK3-214ENST00000564096 IZUMO4Q1ZYL8 232 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 C5orf64Q2M2E5 130 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 ZFP69Q49AA0 526 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 AARDQ4LEZ3 155 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 BCL6BQ8N143 479 aaPredicted RBP10.25□□□□□ -0.77
CLK3-214ENST00000564096 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 RBM14Q96PK6 669 aaKnown RBP10.25□□□□□ -0.77
CLK3-214ENST00000564096 RASL11BQ9BPW5 248 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 FBXL15Q9H469 300 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 TMEM14BQ9NUH8 114 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 VPREB3Q9UKI3 123 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 NSG2Q9Y328 171 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 SIGLEC9Q9Y336 463 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 LSM5Q9Y4Y9 91 aaKnown RBP10.25□□□□□ -0.77
CLK3-214ENST00000564096 OR51B2Q9Y5P1 312 aa10.25□□□□□ -0.77
CLK3-214ENST00000564096 CEBPZOSA8MTT3 80 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 L7N2F9 121 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 SSSCA1O60232 199 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 CNTFRP26992 372 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 IER3P46695 156 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 SPCS3P61009 180 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 VAMP2P63027 116 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 TNFRSF9Q07011 255 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 RAB32Q13637 225 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 TNXAQ16473 311 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 PRSS8Q16651 343 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 Q6YL49 198 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 Q6ZRM9 215 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 TMEM86BQ8N661 226 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
CLK3-214ENST00000564096 CIB3Q96Q77 187 aaPredicted RBP10.24□□□□□ -0.77
CLK3-214ENST00000564096 SMR3AQ99954 134 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms