RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SYNGR2O43760 224 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 TSC22D2O75157 780 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 OR2F2O95006 317 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 C4BPBP20851 252 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 OR2F1Q13607 317 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 VSTM2AQ8TAG5 236 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 FOXC2Q99958 501 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 QTRT1Q9BXR0 403 aaKnown RBP17.68■□□□□ 0.42
LINC01960-201ENST00000563759 ZC4H2Q9NQZ6 224 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 IGHV1-69DA0A0B4J2H0 117 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 C15orf61A6NNL5 157 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 CHST1O43916 411 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 IGHV1-69P01742 117 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 S100A11P31949 105 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 DYNAPQ8N1N2 210 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 MALSU1Q96EH3 234 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 BET1LQ9NYM9 111 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 A0A0D9SG52 128 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 MSGN1A6NI15 193 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 MED6O75586 246 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 KBTBD11O94819 623 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 VENTXO95231 258 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 IFNA17P01571 189 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 CD1BP29016 333 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 P2RY1P47900 373 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 LGALS7P47929 136 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 UBE2KP61086 200 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 VMA21Q3ZAQ7 101 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 RUSC1-AS1Q66K80 236 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 TMUB2Q71RG4 321 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 PIP4P2Q8N4L2 257 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 CFHR4Q92496 578 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 AQP10Q96PS8 301 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 RAB40CQ96S21 281 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 NUP50Q9UKX7 468 aa17.67■□□□□ 0.42
LINC01960-201ENST00000563759 IAPPP10997 89 aa17.66■□□□□ 0.42
LINC01960-201ENST00000563759 RPL12P30050 165 aaKnown RBP17.66■□□□□ 0.42
LINC01960-201ENST00000563759 CAV2P51636 162 aa17.66■□□□□ 0.42
LINC01960-201ENST00000563759 HABP2Q14520 560 aaPredicted RBP17.66■□□□□ 0.42
LINC01960-201ENST00000563759 PUSL1Q8N0Z8 303 aaKnown RBP17.66■□□□□ 0.42
LINC01960-201ENST00000563759 FLNAP21333 2647 aaKnown RBP17.66■□□□□ 0.42
LINC01960-201ENST00000563759 SLC25A17O43808 307 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 BRD3OSQ6XYD6 125 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 ZNF429Q86V71 674 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 KCNRGQ8N5I3 272 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 RITA1Q96K30 269 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 RBKSQ9H477 322 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 CACFD1Q9UGQ2 172 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 PRNDQ9UKY0 176 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 FOXA2Q9Y261 457 aaPredicted RBP17.65■□□□□ 0.42
LINC01960-201ENST00000563759 J3QLI3 93 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 UPK2O00526 184 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 IGKV1D-33P01593 117 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 IGKV1-33P01594 117 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 IGLV2-23P01705 113 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 IGHV4-38-2P0DP08 117 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 HKR1P10072 659 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 HES1Q14469 280 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 AARDQ4LEZ3 155 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 SPINK9Q5DT21 86 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 TSNAXQ99598 290 aaKnown RBP17.65■□□□□ 0.42
LINC01960-201ENST00000563759 C11orf1Q9H5F2 150 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 CSPG4Q6UVK1 2322 aa17.65■□□□□ 0.42
LINC01960-201ENST00000563759 PLXNB1O43157 2135 aa17.64■□□□□ 0.41
LINC01960-201ENST00000563759 CEBPZOSA8MTT3 80 aa17.64■□□□□ 0.41
LINC01960-201ENST00000563759 RPL23AP62750 156 aaKnown RBP17.64■□□□□ 0.41
LINC01960-201ENST00000563759 OPCMLQ14982 345 aa17.64■□□□□ 0.41
LINC01960-201ENST00000563759 OR2C3Q8N628 320 aa17.64■□□□□ 0.41
LINC01960-201ENST00000563759 LYRM2Q9NU23 88 aaPredicted RBP17.64■□□□□ 0.41
LINC01960-201ENST00000563759 TMEM14BQ9NUH8 114 aa17.64■□□□□ 0.41
LINC01960-201ENST00000563759 WSB1Q9Y6I7 421 aa17.64■□□□□ 0.41
LINC01960-201ENST00000563759 KANTRA0A1W2PQU2 76 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 H3BP45 60 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 GPR137BO60478 399 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 TMEM50AO95807 157 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 MOSP00540 346 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 SNRNP70P08621 437 aaKnown RBP17.63■□□□□ 0.41
LINC01960-201ENST00000563759 CD24P25063 80 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 OR4A5Q8NH83 315 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 DTD1Q8TEA8 209 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 ZDHHC16Q969W1 377 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 AJUBAQ96IF1 538 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 IL6RP08887 468 aaPredicted RBP17.63■□□□□ 0.41
LINC01960-201ENST00000563759 CNTFRP26992 372 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 SPCS3P61009 180 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 OR52E5Q8NH55 327 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 TMEM167AQ8TBQ9 72 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 RNF5Q99942 180 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 OR51B2Q9Y5P1 312 aa17.63■□□□□ 0.41
LINC01960-201ENST00000563759 AVPP01185 164 aa17.62■□□□□ 0.41
LINC01960-201ENST00000563759 RPL8P62917 257 aaKnown RBP17.62■□□□□ 0.41
LINC01960-201ENST00000563759 MMDQ15546 238 aa17.62■□□□□ 0.41
LINC01960-201ENST00000563759 OR2T10Q8NGZ9 312 aa17.62■□□□□ 0.41
LINC01960-201ENST00000563759 FKBP11Q9NYL4 201 aa17.62■□□□□ 0.41
LINC01960-201ENST00000563759 PSENENQ9NZ42 101 aa17.62■□□□□ 0.41
LINC01960-201ENST00000563759 FAM24AA6NFZ4 105 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 BRS3P32247 399 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 PAX9P55771 341 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 HNF4GQ14541 408 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 CIB3Q96Q77 187 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms