RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SAA1P0DJI8 122 aaPredicted RBP12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 HIST1H1DP16402 221 aaKnown RBP12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 MXD1Q05195 221 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 C19orf35Q6ZS72 473 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 FAM223AQ8IWN6 122 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 ADTRPQ96IZ2 230 aa12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 RBM7Q9Y580 266 aaKnown RBP12.67□□□□□ -0.38
HDGFL3-203ENST00000563404 A6NHS1 94 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 RAB6AP20340 208 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 TGFBR1P36897 503 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 DEFB114Q30KQ6 69 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 OSR1Q8TAX0 266 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 GINS4Q9BRT9 223 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 DAPK2Q9UIK4 370 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 ETV7Q9Y603 341 aa12.66□□□□□ -0.38
HDGFL3-203ENST00000563404 J3QRK9 145 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 OR2J3O76001 311 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 TPPPO94811 219 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 HLA-AP01891 365 aaKnown RBP12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 SPCS2Q15005 226 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 CDK10Q15131 360 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 Q6ZS49 121 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 LAX1Q8IWV1 398 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 AP3S1Q92572 193 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 SELENOKQ9Y6D0 94 aa12.65□□□□□ -0.38
HDGFL3-203ENST00000563404 CCDC160A6NGH7 325 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 HMX3A6NHT5 357 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 TEX22C9J3V5 150 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 E7EUB6 86 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 FCGR3BO75015 233 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 IGLV2-14P01704 120 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 FOLR2P14207 255 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 KIR2DS2P43631 304 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 C15orf32Q32M92 178 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 IDNKQ5T6J7 187 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 NECAP1Q8NC96 275 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 WDR89Q96FK6 387 aaPredicted RBP12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 SRD5A3Q9H8P0 318 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 ZC4H2Q9NQZ6 224 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 SLC2A8Q9NY64 477 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 CCDC59Q9P031 241 aaKnown RBP12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
HDGFL3-203ENST00000563404 A0A1B0GW64 132 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 METTL21EPA6NDL7 271 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 OR11H12B2RN74 326 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 TUSC2O75896 110 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 SCGNO76038 276 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 JTBO76095 146 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 OR2C1O95371 312 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 OR2B11Q5JQS5 317 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 MMD2Q8IY49 270 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 ZNF645Q8N7E2 425 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 DYNLRB2Q8TF09 96 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 SPIN2AQ99865 258 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 SPIN2BQ9BPZ2 258 aa12.63□□□□□ -0.39
HDGFL3-203ENST00000563404 A0A0A6YYH2 397 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 IGKV1D-13A0A0B4J2D9 117 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 A6NJ64 397 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 IGHV3-23P01764 117 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 IL6RP08887 468 aaPredicted RBP12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 IGKV1-13P0DP09 117 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 NFYAP23511 347 aaPredicted RBP12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 TALDO1P37837 337 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 BRWD1-AS2P59051 145 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 MZT2AQ6P582 158 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 CACNG8Q8WXS5 425 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 DCUN1D5Q9BTE7 237 aa12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 RBMX2Q9Y388 322 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-203ENST00000563404 FRAS1Q86XX4 4008 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 SMIM30A4D0T7 59 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 LGALS9O00182 355 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 GGCTO75223 188 aaKnown RBP12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 ACTL6BO94805 426 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 NDUFB8O95169 186 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 HLA-DQB1P01920 261 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 DTYMKP23919 212 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 EIF4EBP1Q13541 118 aaPredicted RBP12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 ARL6IP1Q15041 203 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 KCTD9Q7L273 389 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 IL17DQ8TAD2 202 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 CCDC140Q96MF4 163 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 FANCD2OSQ96PS1 177 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 FBXL7Q9UJT9 491 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 S4R3C0 116 aa12.61□□□□□ -0.39
HDGFL3-203ENST00000563404 CREBL2O60519 120 aaPredicted RBP12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 CDNFQ49AH0 187 aa12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 SLC25A42Q86VD7 318 aa12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 PUSL1Q8N0Z8 303 aaKnown RBP12.6□□□□□ -0.39
HDGFL3-203ENST00000563404 ST6GALNAC5Q9BVH7 336 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms