RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 PLEKHA2Q9HB19 425 aa9.38□□□□□ -0.91
NSMCE1-204ENST00000563273 SIGLEC8Q9NYZ4 499 aa9.38□□□□□ -0.91
NSMCE1-204ENST00000563273 EHFQ9NZC4 300 aa9.38□□□□□ -0.91
NSMCE1-204ENST00000563273 PEF1Q9UBV8 284 aaKnown RBP9.38□□□□□ -0.91
NSMCE1-204ENST00000563273 SMIM31A0A1B0GVY4 71 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 TEX22C9J3V5 150 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 SULT1C2O00338 296 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 TPPPO94811 219 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 HPRT1P00492 218 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 SMIM18P0DKX4 95 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 GNRHRP30968 328 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 RPL27AP46776 148 aaKnown RBP9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 RORCP51449 518 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 HERV-K104P61576 105 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 VBP1P61758 197 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 RPL8P62917 257 aaKnown RBP9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 RHOGP84095 191 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 ZNF818PQ6ZRF7 136 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 SPAG16Q8N0X2 631 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 NECAP1Q8NC96 275 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 SLC2A9Q9NRM0 540 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
NSMCE1-204ENST00000563273 MEIS3P1A6NDR6 274 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 TNFSF12O43508 249 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 RBMXL2O75526 392 aaKnown RBP9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 IGLV1-51P01701 117 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 CRYGCP07315 174 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 NQO2P16083 231 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 FXYD4P59646 89 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 ZNF45Q02386 682 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 CTF1Q16619 201 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 TATDN3Q17R31 274 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 C10orf55Q5SWW7 151 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 MZT2AQ6P582 158 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 OR5H2Q8NGV7 314 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 AP3S1Q92572 193 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 AKIP1Q9NQ31 210 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 COMMD9Q9P000 198 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 SMAD5-AS1Q9Y6J3 95 aa9.36□□□□□ -0.91
NSMCE1-204ENST00000563273 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 DHFRP00374 187 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 APELAP0DMC3 54 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 HLA-GP17693 338 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 RCVRNP35243 200 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 RFX2P48378 723 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 ATP5G2Q06055 141 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 EXOSC2Q13868 293 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 THOC7Q6I9Y2 204 aaKnown RBP9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 OR4A47Q6IF82 309 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 TMEM17Q86X19 198 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 LYSMD2Q8IV50 215 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 CMTM1Q8IZ96 169 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 OR9G4Q8NGQ1 327 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 OR6F1Q8NGZ6 308 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 GPHA2Q96T91 129 aa9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 FAM212BQ9NTI7 297 aaPredicted RBP9.35□□□□□ -0.91
NSMCE1-204ENST00000563273 A0A1B0GW64 132 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 PGLYRP1O75594 196 aaPredicted RBP9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 LY86O95711 162 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 PMP2P02689 132 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 FCER2P06734 321 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 GP9P14770 177 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 SPNP16150 400 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 HIST1H1BP16401 226 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 ZNF182P17025 639 aaPredicted RBP9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 CTRB1P17538 263 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 ELK1P19419 428 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 F2RP25116 425 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 PSMB6P28072 239 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 HRH1P35367 487 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 RPEL1Q2QD12 228 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 AADACL3Q5VUY0 350 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 CTRB2Q6GPI1 263 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 LPCAT3Q6P1A2 487 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 IL34Q6ZMJ4 242 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 FYTTD1Q96QD9 318 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 MRPS26Q9BYN8 205 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-204ENST00000563273 DPPA5A6NC42 116 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 E7EUB6 86 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 BMPR1BO00238 502 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 GPR31O00270 319 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 UPK2O00526 184 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 HPGDSO60760 199 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 S1PR2O95136 353 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 TRBV12-3P01733 135 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 PRH1P02810 166 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 S100GP29377 79 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 ALDH3B2P48448 385 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 UCP3P55916 312 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 SYNJ2BPP57105 145 aa9.33□□□□□ -0.92
NSMCE1-204ENST00000563273 OR2B8PP59922 312 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms