RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 KHDC1LQ5JSQ8 128 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 C10orf55Q5SWW7 151 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 OR4A47Q6IF82 309 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 UNQ5815/PRO19632Q6UWF5 114 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 ZNF695Q8IW36 515 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 SLC38A6Q8IZM9 456 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 TCTEX1D1Q8N7M0 179 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 KLHL30-AS1Q8NEE0 82 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 OR4C16Q8NGL9 310 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 OR6Q1Q8NGQ2 317 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 TERB2Q8NHR7 220 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 BORCS5Q969J3 196 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 TRIM63Q969Q1 353 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 DUX3Q96PT4 197 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 OR2A7Q96R45 310 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 P2RX4Q99571 388 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 GNB4Q9HAV0 340 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 PLEKHA2Q9HB19 425 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 NDUFA13Q9P0J0 144 aa6.64□□□□□ -1.35
UBR1-204ENST00000563239 TEX22C9J3V5 150 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 I3L521 148 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 BRI3O95415 125 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 HRASP01112 189 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 IGKV1-39P01597 117 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 IGKV1D-39P04432 117 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 IFNA6P05013 189 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 AKAIN1P0CW23 69 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 APELAP0DMC3 54 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 PF4V1P10720 104 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 SLC6A1P30531 599 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 ETV6P41212 452 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 LPAR6P43657 344 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 TAS2R31P59538 309 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 RND3P61587 244 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 KLF9Q13886 244 aaPredicted RBP6.63□□□□□ -1.35
UBR1-204ENST00000563239 TNXAQ16473 311 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 DEFB136Q30KP8 78 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 LPCAT3Q6P1A2 487 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 SSX9Q7RTT3 188 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 TBC1D26Q86UD7 250 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 MRPL41Q8IXM3 137 aaKnown RBP6.63□□□□□ -1.35
UBR1-204ENST00000563239 MMD2Q8IY49 270 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 CMTM1Q8IZ96 169 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 OR5T1Q8NG75 326 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 OR5M8Q8NGP6 311 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 OR13C8Q8NGS7 320 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 CD300LFQ8TDQ1 290 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 SRSF12Q8WXF0 261 aaKnown RBP6.63□□□□□ -1.35
UBR1-204ENST00000563239 UBE2E2Q96LR5 201 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 MS4A10Q96PG2 267 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 RTBDNQ9BSG5 229 aaPredicted RBP6.63□□□□□ -1.35
UBR1-204ENST00000563239 THAP7Q9BT49 309 aaPredicted RBP6.63□□□□□ -1.35
UBR1-204ENST00000563239 SLC2A9Q9NRM0 540 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 BET1LQ9NYM9 111 aa6.63□□□□□ -1.35
UBR1-204ENST00000563239 A6NHS1 94 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 G3V4G9 280 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 CCL24O00175 119 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 UPK2O00526 184 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 MPPED1O15442 326 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 RPA2P15927 270 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 NQO2P16083 231 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 PTBP1P26599 531 aaKnown RBP eCLIP6.62□□□□□ -1.357e-6■□□□□ 8.1
UBR1-204ENST00000563239 MYCNOSP40205 109 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 PPP5CP53041 499 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 RUNX1Q01196 453 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 ZNF45Q02386 682 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 FHL3Q13643 280 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 MEF2DQ14814 521 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 SCGB2B2Q4G0G5 96 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 PYDC2Q56P42 97 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 TMEM65Q6PI78 240 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 C19orf35Q6ZS72 473 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 CADM3Q8N126 398 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 POC5Q8NA72 575 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 ADAD2Q8NCV1 583 aaKnown RBP6.62□□□□□ -1.35
UBR1-204ENST00000563239 OR4A5Q8NH83 315 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 VSTM2AQ8TAG5 236 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 MARCH1Q8TCQ1 289 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 ZNF486Q96H40 463 aaPredicted RBP6.62□□□□□ -1.35
UBR1-204ENST00000563239 TMEM68Q96MH6 324 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 SDHCQ99643 169 aaPredicted RBP6.62□□□□□ -1.35
UBR1-204ENST00000563239 SRRQ9GZT4 340 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 ALX4Q9H161 411 aaPredicted RBP6.62□□□□□ -1.35
UBR1-204ENST00000563239 FAM212BQ9NTI7 297 aaPredicted RBP6.62□□□□□ -1.35
UBR1-204ENST00000563239 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 SLC2A8Q9NY64 477 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 COMMD9Q9P000 198 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 VSIG4Q9Y279 399 aa6.62□□□□□ -1.35
UBR1-204ENST00000563239 HMX3A6NHT5 357 aa6.61□□□□□ -1.35
UBR1-204ENST00000563239 MARCH11A6NNE9 402 aa6.61□□□□□ -1.35
UBR1-204ENST00000563239 DISC1C4P0D8 188 aa6.61□□□□□ -1.35
UBR1-204ENST00000563239 H3BUA1 57 aa6.61□□□□□ -1.35
UBR1-204ENST00000563239 CREBL2O60519 120 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms