RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 KPTNQ9Y664 436 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 TEX46H3BTG2 121 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 MED6O75586 246 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 CST7O76096 145 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 ARG1P05089 322 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 TMEM177Q53S58 311 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 MARC2Q969Z3 335 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 FLYWCH2Q96CP2 140 aaKnown RBP14.6□□□□□ -0.07
COMMD4-208ENST00000563220 SIRPDQ9H106 197 aa14.6□□□□□ -0.07
COMMD4-208ENST00000563220 UNKLQ9H9P5 680 aaKnown RBP14.6□□□□□ -0.07
COMMD4-208ENST00000563220 IGHV3-72A0A0B4J1Y9 119 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 TAS2R30P59541 319 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 PDPNQ86YL7 162 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 OSR1Q8TAX0 266 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-208ENST00000563220 WASHC3Q9Y3C0 194 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 IGHV1-3A0A0C4DH29 117 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 ODF3BA8MYP8 253 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 FOXH1O75593 365 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 GAPDHP04406 335 aaKnown RBP14.59□□□□□ -0.07
COMMD4-208ENST00000563220 OR4C13Q8NGP0 309 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 DTD1Q8TEA8 209 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 RITA1Q96K30 269 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 HARBI1Q96MB7 349 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 LPAR2Q9HBW0 351 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 AMMECR1Q9Y4X0 333 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-208ENST00000563220 INSIG2Q9Y5U4 225 aa14.59□□□□□ -0.07
COMMD4-208ENST00000563220 VPS13CQ709C8 3753 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 RNASEK-C17orf49H0YIS7 233 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 IFNA17P01571 189 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 EIF5AP63241 154 aaKnown RBP14.58□□□□□ -0.08
COMMD4-208ENST00000563220 TMEM267Q0VDI3 215 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-208ENST00000563220 BTN1A1Q13410 526 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 SPANXN5Q5MJ07 72 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 ZNF429Q86V71 674 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 TMEM217Q8N7C4 229 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-208ENST00000563220 OR52E5Q8NH55 327 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 RNF141Q8WVD5 230 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 RPEQ96AT9 228 aa14.58□□□□□ -0.08
COMMD4-208ENST00000563220 POLR3KQ9Y2Y1 108 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-208ENST00000563220 A0A1W2PRD5 423 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 A0A1W2PRF3 423 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 A0A1W2PRM7 423 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 C15orf61A6NNL5 157 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 CEBPZOSA8MTT3 80 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 UPK2O00526 184 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 JTBO76095 146 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 SAA1P0DJI8 122 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-208ENST00000563220 HOXB4P17483 251 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-208ENST00000563220 MC5RP33032 325 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 DYNLT3P51808 116 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 SPCS3P61009 180 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 RPS16P62249 146 aaKnown RBP14.57□□□□□ -0.08
COMMD4-208ENST00000563220 BAXQ07812 192 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 CLINT1Q14677 625 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 LHFPL4Q7Z7J7 247 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 PUSL1Q8N0Z8 303 aaKnown RBP14.57□□□□□ -0.08
COMMD4-208ENST00000563220 OR5C1Q8NGR4 320 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 TMEM14BQ9NUH8 114 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 IGLV2-23P01705 113 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 METTL15P1P0C7V9 234 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 MYOD1P15172 320 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 HTR1DP28221 377 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 SULT1A1P50225 295 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 ARL16Q0P5N6 197 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 PDLIM3Q53GG5 364 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-208ENST00000563220 TPTE2P1Q5T6R2 138 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 TENM4Q6N022 2769 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 MOB3BQ86TA1 216 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 UBAC2Q8NBM4 344 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 BPIFCQ8NFQ6 507 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 OR1S2Q8NGQ3 325 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 BET1LQ9NYM9 111 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 DPM3Q9P2X0 92 aa14.57□□□□□ -0.08
COMMD4-208ENST00000563220 FOXA2Q9Y261 457 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-208ENST00000563220 TOX4O94842 621 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 RAB13P51153 203 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 DVL1P1P54792 670 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-208ENST00000563220 TMEM14EPQ6UXP3 125 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 HAPLN4Q86UW8 402 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 OR4C12Q96R67 309 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 TBX15Q96SF7 602 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 AIFM2Q9BRQ8 373 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 MS4A7Q9GZW8 240 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-208ENST00000563220 TCF19Q9Y242 345 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 CELSR2Q9HCU4 2923 aa14.56□□□□□ -0.08
COMMD4-208ENST00000563220 A0A1W2PPI3 338 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 PXDC1Q5TGL8 231 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 STX12Q86Y82 276 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 TMED6Q8WW62 240 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 PSMG3-AS1Q96PY0 264 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 ARV1Q9H2C2 271 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 APOC3P02656 99 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 FAM157CP0CG43 387 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 VDAC2P45880 294 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-208ENST00000563220 DSCR9P59020 149 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 HSPE1P61604 102 aaKnown RBP14.55□□□□□ -0.08
COMMD4-208ENST00000563220 EIF5AL1Q6IS14 154 aaKnown RBP14.55□□□□□ -0.08
COMMD4-208ENST00000563220 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-208ENST00000563220 CIB3Q96Q77 187 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms