RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
USB1-208ENST00000563207 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
USB1-208ENST00000563207 AP4M1O00189 453 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 SLC25A17O43808 307 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 CRYGBP07316 175 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 RPA2P15927 270 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 NQO2P16083 231 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 POU2AF1Q16633 256 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 OR2B11Q5JQS5 317 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 ZNF562Q6V9R5 426 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 REC114Q7Z4M0 266 aa12.29□□□□□ -0.44
USB1-208ENST00000563207 RTBDNQ9BSG5 229 aaPredicted RBP12.29□□□□□ -0.44
USB1-208ENST00000563207 H0Y980 276 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 K7EIL1 84 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 RAMP3O60896 148 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 PF4P02776 101 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 IGF1P05019 195 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 HOXD3P31249 432 aaPredicted RBP12.28□□□□□ -0.44
USB1-208ENST00000563207 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
USB1-208ENST00000563207 OR4X2Q8NGF9 303 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 RHOVQ96L33 236 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 C5orf66Q9H5L9 145 aa12.28□□□□□ -0.44
USB1-208ENST00000563207 IGHV7-81A0A0B4J1V7 117 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 C3orf85A0A1B0GTC6 90 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 WI2-2373I1.2A0A1W2PRP0 233 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 PSMB11A5LHX3 300 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 OR2A4O95047 310 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 SERPINE2P07093 398 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 FGF2P09038 288 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 PI3P19957 117 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 ZNF585BQ52M93 769 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 LCNL1Q6ZST4 164 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 MMD2Q8IY49 270 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 PUSL1Q8N0Z8 303 aaKnown RBP12.27□□□□□ -0.45
USB1-208ENST00000563207 LINC00482Q8N8I6 264 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 OR4A5Q8NH83 315 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 DUX3Q96PT4 197 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 OR2A7Q96R45 310 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 OR51J1Q9H342 316 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 KCNIP3Q9Y2W7 256 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.45
USB1-208ENST00000563207 TNCP24821 2201 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 PIGBOS1A0A0B4J2F0 54 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 ATG12O94817 140 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 SAA1P0DJI8 122 aaPredicted RBP12.26□□□□□ -0.45
USB1-208ENST00000563207 MAS1LP35410 378 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 LPAR6P43657 344 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 ERVK-16P61578 105 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 SLC35B1P78383 322 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 CX3CL1P78423 397 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
USB1-208ENST00000563207 SGPP2Q8IWX5 399 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
USB1-208ENST00000563207 HSPB9Q9BQS6 159 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 NAA60Q9H7X0 242 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 BET1LQ9NYM9 111 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 VSIG4Q9Y279 399 aa12.26□□□□□ -0.45
USB1-208ENST00000563207 TEX13DA0A0J9YY54 714 aaPredicted RBP12.25□□□□□ -0.45
USB1-208ENST00000563207 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 FCN1O00602 326 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 PLA2G10O15496 165 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 LYRM1O43325 122 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 UPK1BO75841 260 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 KBTBD11O94819 623 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 S1PR2O95136 353 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 CA2P00918 260 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 CRIP2P52943 208 aaPredicted RBP12.25□□□□□ -0.45
USB1-208ENST00000563207 DHODHQ02127 395 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 PRSS8Q16651 343 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 C8orf86Q6ZUL3 223 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 STPG2Q8N412 459 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 COMMD1Q8N668 190 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 DMBX1Q8NFW5 382 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 TMEM167AQ8TBQ9 72 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 GALNT14Q96FL9 552 aa12.25□□□□□ -0.45
USB1-208ENST00000563207 LINC00854A0A1B0GVQ3 168 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 MARCH11A6NNE9 402 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 ACTL6BO94805 426 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 NDUFB6O95139 128 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 CNIH1O95406 144 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 IL6RP08887 468 aaPredicted RBP12.24□□□□□ -0.45
USB1-208ENST00000563207 ANXA3P12429 323 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 VDAC1P21796 283 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 UCP1P25874 307 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 UBE2MP61081 183 aaKnown RBP12.24□□□□□ -0.45
USB1-208ENST00000563207 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
USB1-208ENST00000563207 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 TMEM128Q5BJH2 165 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 OR4A47Q6IF82 309 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 MZT2BQ6NZ67 158 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 TMEM68Q96MH6 324 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 TP53RKQ96S44 253 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 CLCC1Q96S66 551 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 ZNF430Q9H8G1 570 aaPredicted RBP12.24□□□□□ -0.45
USB1-208ENST00000563207 TPSG1Q9NRR2 321 aa12.24□□□□□ -0.45
USB1-208ENST00000563207 CDS2O95674 445 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 CCR6P51684 374 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 ASAH1Q13510 395 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms