RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SFRP2Q96HF1 295 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 IFI27L2Q9H2X8 130 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 TMEM140Q9NV12 185 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 DUSP13Q9UII6 198 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 LSM4Q9Y4Z0 139 aaKnown RBP10.82□□□□□ -0.68
USB1-207ENST00000563149 LY96Q9Y6Y9 160 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 A0A0U1RQK1 487 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 ZNF320A2RRD8 509 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 C15orf61A6NNL5 157 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 M0R296 226 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CGB3P0DN86 165 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CGB7P0DN87 165 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 THBS3P49746 956 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CCL11P51671 97 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 RAB31Q13636 194 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CLEC12BQ2HXU8 276 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 BEND2Q8NDZ0 799 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 OR5T1Q8NG75 326 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 ADTRPQ96IZ2 230 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 PRO1933Q9H354 126 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 PATZ1Q9HBE1 687 aaKnown RBP10.82□□□□□ -0.68
USB1-207ENST00000563149 FOXA2Q9Y261 457 aaPredicted RBP10.82□□□□□ -0.68
USB1-207ENST00000563149 TRAPPC1Q9Y5R8 145 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 SLC25A15Q9Y619 301 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 ARL2-SNX15V9GYD0 113 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CGAP01215 116 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 IGHV3-13P01766 116 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 DEFA4P12838 97 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 RPL29P47914 159 aaKnown RBP10.81□□□□□ -0.68
USB1-207ENST00000563149 YPEL3P61236 119 aaPredicted RBP10.81□□□□□ -0.68
USB1-207ENST00000563149 HSPE1P61604 102 aaKnown RBP10.81□□□□□ -0.68
USB1-207ENST00000563149 RHOBP62745 196 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 C3orf36Q3SXR2 165 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 TEPPQ6URK8 271 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 GBGT1Q8N5D6 347 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 FDCSPQ8NFU4 85 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 MEGF10Q96KG7 1140 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 RHOVQ96L33 236 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 SFXN3Q9BWM7 321 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 OPN3Q9H1Y3 402 aaPredicted RBP10.81□□□□□ -0.68
USB1-207ENST00000563149 ELOVL5Q9NYP7 299 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 CALYQ9NYX4 217 aa10.81□□□□□ -0.68
USB1-207ENST00000563149 A8MWP6 167 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 LHBP01229 141 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 IL6RP08887 468 aaPredicted RBP10.8□□□□□ -0.68
USB1-207ENST00000563149 C1QTNF9P0C862 333 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 POU2AF1Q16633 256 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 TMEM30BQ3MIR4 351 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 ABHD12Q8N2K0 398 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 DEFB123Q8N688 67 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 TECTAO75443 2155 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 CFAP54Q96N23 3096 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 C9JCJ5 164 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 TNFSF13O75888 250 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 AREGP15514 252 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 NPY1RP25929 384 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 GCHFRP30047 84 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 ZNF134P52741 427 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 ATP5IP56385 69 aaPredicted RBP10.8□□□□□ -0.68
USB1-207ENST00000563149 ZNF664Q8N3J9 261 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 SGMS2Q8NHU3 365 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 UHRF2Q96PU4 802 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 ENY2Q9NPA8 101 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 TMEM14BQ9NUH8 114 aa10.8□□□□□ -0.68
USB1-207ENST00000563149 TRAV3A0A0B4J244 114 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 TIMP3P35625 211 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 C17orf58Q2M2W7 97 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
USB1-207ENST00000563149 SLC24A4Q8NFF2 622 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 FAM222BQ8WU58 562 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 SDSLQ96GA7 329 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 C1orf159Q96HA4 380 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 NDUFAF3Q9BU61 184 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 DERL1Q9BUN8 251 aa10.79□□□□□ -0.68
USB1-207ENST00000563149 SLC25A10Q9UBX3 287 aaPredicted RBP10.79□□□□□ -0.68
USB1-207ENST00000563149 GTF3C1Q12789 2109 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 TRGV10A0A0A0MS01 117 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 MBD3L4A6NDZ8 208 aaPredicted RBP10.78□□□□□ -0.68
USB1-207ENST00000563149 MBD3L3A6NE82 208 aaPredicted RBP10.78□□□□□ -0.68
USB1-207ENST00000563149 MBD3L5A6NJ08 208 aaPredicted RBP10.78□□□□□ -0.68
USB1-207ENST00000563149 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
USB1-207ENST00000563149 NKX2-8O15522 239 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 GLRXP35754 106 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 EFNB3Q15768 340 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 SSX2Q16385 188 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 ARSJQ5FYB0 599 aaPredicted RBP10.78□□□□□ -0.68
USB1-207ENST00000563149 TEX38Q6PEX7 206 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 VKORC1L1Q8N0U8 176 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 ZNF114Q8NC26 417 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
USB1-207ENST00000563149 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
USB1-207ENST00000563149 OR2V2Q96R30 315 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms