RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TAS2R19P59542 299 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 PUSL1Q8N0Z8 303 aaKnown RBP12.88□□□□□ -0.35
CDT1-202ENST00000562747 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 OR51H1Q8NH63 302 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 RHOVQ96L33 236 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 P2RX4Q99571 388 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 VSIG4Q9Y279 399 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 TENM3Q9P273 2699 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 H3BUA1 57 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 CCL24O00175 119 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 ACTL6BO94805 426 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 CD74P04233 296 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 RLN1P04808 185 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 TNFSF8P32971 234 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 TAS2R31P59538 309 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 RUNX1Q01196 453 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 MRPL41Q8IXM3 137 aaKnown RBP12.87□□□□□ -0.35
CDT1-202ENST00000562747 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 TMEM167AQ8TBQ9 72 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 SRSF12Q8WXF0 261 aaKnown RBP12.87□□□□□ -0.35
CDT1-202ENST00000562747 RAX2Q96IS3 184 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 RSRP1Q9BUV0 290 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
CDT1-202ENST00000562747 SLA2Q9H6Q3 261 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 PLEKHA2Q9HB19 425 aa12.87□□□□□ -0.35
CDT1-202ENST00000562747 WI2-2373I1.2A0A1W2PRP0 233 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 BRI3O95415 125 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 DUS4LO95620 317 aaKnown RBP12.86□□□□□ -0.35
CDT1-202ENST00000562747 NQO2P16083 231 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 F2RP25116 425 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 MAS1LP35410 378 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 ASPHD1Q5U4P2 390 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 LHFPL1Q86WI0 220 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 OR4A5Q8NH83 315 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 RCC1LQ96I51 464 aaKnown RBP12.86□□□□□ -0.35
CDT1-202ENST00000562747 PHB2Q99623 299 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 SOSTQ9BQB4 213 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 GNB4Q9HAV0 340 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 BET1LQ9NYM9 111 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 COMMD9Q9P000 198 aa12.86□□□□□ -0.35
CDT1-202ENST00000562747 FABP12A6NFH5 140 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 MSGN1A6NI15 193 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 I3L521 148 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
CDT1-202ENST00000562747 RAB3DO95716 219 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 SSX9Q7RTT3 188 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 DGCR14Q96DF8 476 aaKnown RBP12.85□□□□□ -0.35
CDT1-202ENST00000562747 SPIN2AQ99865 258 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 SPIN2BQ9BPZ2 258 aa12.85□□□□□ -0.35
CDT1-202ENST00000562747 FAM212BQ9NTI7 297 aaPredicted RBP12.85□□□□□ -0.35
CDT1-202ENST00000562747 S1PR2O95136 353 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 TPPP2P59282 170 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 FHL3Q13643 280 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 MEF2DQ14814 521 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 PHLDA2Q53GA4 152 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 OR4A47Q6IF82 309 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 OR4D10Q8NGI6 311 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 CASTOR1Q8WTX7 329 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 ZNF486Q96H40 463 aaPredicted RBP12.84□□□□□ -0.35
CDT1-202ENST00000562747 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 DUX3Q96PT4 197 aa12.84□□□□□ -0.35
CDT1-202ENST00000562747 TNCP24821 2201 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 MPPED1O15442 326 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 TRGV3P03979 118 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 IL6RP08887 468 aaPredicted RBP12.83□□□□□ -0.36
CDT1-202ENST00000562747 FGF2P09038 288 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 S100A5P33763 92 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.36
CDT1-202ENST00000562747 TBC1D26Q86UD7 250 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 DMBX1Q8NFW5 382 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 TERB2Q8NHR7 220 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 MCRIP2Q9BUT9 160 aaKnown RBP12.83□□□□□ -0.36
CDT1-202ENST00000562747 GPR61Q9BZJ8 451 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 SLC2A9Q9NRM0 540 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 ZNF355PQ9NSJ1 428 aa12.83□□□□□ -0.36
CDT1-202ENST00000562747 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
CDT1-202ENST00000562747 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 AKAIN1P0CW23 69 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 PGAM2P15259 253 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
CDT1-202ENST00000562747 LPAR6P43657 344 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 RPL27AP46776 148 aaKnown RBP12.82□□□□□ -0.36
CDT1-202ENST00000562747 ERVK-16P61578 105 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 RND3P61587 244 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 ZNF616Q08AN1 781 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 C10orf55Q5SWW7 151 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 CADM3Q8N126 398 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 ADAD2Q8NCV1 583 aaKnown RBP12.82□□□□□ -0.36
CDT1-202ENST00000562747 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
CDT1-202ENST00000562747 TMEM140Q9NV12 185 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms