RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ATP5G2Q06055 141 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 FAM209BQ5JX69 171 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 VAX1Q5SQQ9 334 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 C10orf55Q5SWW7 151 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 ZNF343Q6P1L6 599 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 ANKRD13BQ86YJ7 626 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 PUSL1Q8N0Z8 303 aaKnown RBP13.71□□□□□ -0.21
CMTM3-204ENST00000562357 OR4A5Q8NH83 315 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 FYTTD1Q96QD9 318 aaKnown RBP13.71□□□□□ -0.21
CMTM3-204ENST00000562357 ZNF2Q9BSG1 426 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-204ENST00000562357 ZNF257Q9Y2Q1 563 aa13.71□□□□□ -0.21
CMTM3-204ENST00000562357 PMP2P02689 132 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 S100GP29377 79 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 TAS2R31P59538 309 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 RPL8P62917 257 aaKnown RBP13.7□□□□□ -0.22
CMTM3-204ENST00000562357 DEFA5Q01523 94 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 DYRK1AQ13627 763 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 CMTM1Q8IZ96 169 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 OR6F1Q8NGZ6 308 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 OR51H1Q8NH63 302 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 SCPEP1Q9HB40 452 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 LSM4Q9Y4Z0 139 aaKnown RBP13.7□□□□□ -0.22
CMTM3-204ENST00000562357 SMAD5-AS1Q9Y6J3 95 aa13.7□□□□□ -0.22
CMTM3-204ENST00000562357 HPRT1P00492 218 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 EIF4EP06730 217 aaKnown RBP13.69□□□□□ -0.22
CMTM3-204ENST00000562357 NHLRC4P0CG21 123 aaPredicted RBP13.69□□□□□ -0.22
CMTM3-204ENST00000562357 NQO2P16083 231 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 SPNP16150 400 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 HLA-GP17693 338 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 RFX2P48378 723 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 ERVK-16P61578 105 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 EXOSC2Q13868 293 aaKnown RBP13.69□□□□□ -0.22
CMTM3-204ENST00000562357 DHRS11Q6UWP2 260 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 ZNF818PQ6ZRF7 136 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 DMBX1Q8NFW5 382 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 MOB3AQ96BX8 217 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 AKIP1Q9NQ31 210 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 BET1LQ9NYM9 111 aa13.69□□□□□ -0.22
CMTM3-204ENST00000562357 HMX3A6NHT5 357 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 FAM25AB3EWG3 89 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 FAM25CB3EWG5 89 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 FAM25GB3EWG6 89 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 GABARAPO95166 117 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 PRH1P02810 166 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 NAT1P18440 290 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 BRWD1-AS2P59051 145 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 TSPAN5P62079 268 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 OR4A47Q6IF82 309 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 OR9G4Q8NGQ1 327 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 PLEKHA2Q9HB19 425 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 SLC2A9Q9NRM0 540 aa13.68□□□□□ -0.22
CMTM3-204ENST00000562357 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 NPIPB5A8MRT5 1133 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 HPGDSO60760 199 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 OR2J3O76001 311 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 SMIM18P0DKX4 95 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 GP9P14770 177 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 HLA-DMAP28067 261 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 GNRHRP30968 328 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 RCVRNP35243 200 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 HRH1P35367 487 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
CMTM3-204ENST00000562357 C11orf87Q6NUJ2 197 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 GPX8Q8TED1 209 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 MRPS26Q9BYN8 205 aaKnown RBP13.67□□□□□ -0.22
CMTM3-204ENST00000562357 COMMD5Q9GZQ3 224 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 PEMTQ9UBM1 199 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 ADAM30Q9UKF2 790 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 TNCP24821 2201 aa13.67□□□□□ -0.22
CMTM3-204ENST00000562357 TEX22C9J3V5 150 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 RLN1P04808 185 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 ZNF735P0CB33 412 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 DEFA4P12838 97 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 ZNF45Q02386 682 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 C15orf32Q32M92 178 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 GPR107Q5VW38 600 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
CMTM3-204ENST00000562357 H0Y980 276 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 GPR31O00270 319 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 IL6RP08887 468 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-204ENST00000562357 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
CMTM3-204ENST00000562357 ZNF182P17025 639 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-204ENST00000562357 ELK1P19419 428 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 F2RP25116 425 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 POU2AF1Q16633 256 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 FBXL7Q9UJT9 491 aa13.65□□□□□ -0.22
CMTM3-204ENST00000562357 UPK2O00526 184 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 CYB5BO43169 146 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 PGLYRP1O75594 196 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-204ENST00000562357 S1PR2O95136 353 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms