RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 AIFM2Q9BRQ8 373 aa11.92□□□□□ -0.5
CCDC113-203ENST00000561517 COA4Q9NYJ1 87 aa11.92□□□□□ -0.5
CCDC113-203ENST00000561517 FAM25AB3EWG3 89 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 FAM25CB3EWG5 89 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 FAM25GB3EWG6 89 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 TPPPO94811 219 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 HPRT1P00492 218 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 HLA-DMAP28067 261 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 RCVRNP35243 200 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 POU2AF1Q16633 256 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 ZNF429Q86V71 674 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 OR6F1Q8NGZ6 308 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 RANGRFQ9HD47 186 aaPredicted RBP11.91□□□□□ -0.5
CCDC113-203ENST00000561517 BET1LQ9NYM9 111 aa11.91□□□□□ -0.5
CCDC113-203ENST00000561517 TRBV9A0A0B4J1U6 114 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 TEX22C9J3V5 150 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 MPPED1O15442 326 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 RBMXL2O75526 392 aaKnown RBP11.9□□□□□ -0.5
CCDC113-203ENST00000561517 IL6RP08887 468 aaPredicted RBP11.9□□□□□ -0.5
CCDC113-203ENST00000561517 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
CCDC113-203ENST00000561517 TAS2R31P59538 309 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 OR51H1Q8NH63 302 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 PLEKHA2Q9HB19 425 aa11.9□□□□□ -0.5
CCDC113-203ENST00000561517 A0A1B0GW64 132 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 E7EUB6 86 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 PGLYRP1O75594 196 aaPredicted RBP11.89□□□□□ -0.51
CCDC113-203ENST00000561517 ZNF735P0CB33 412 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 NQO2P16083 231 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 ZP3P21754 424 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 ECI1P42126 302 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 RPL8P62917 257 aaKnown RBP11.89□□□□□ -0.51
CCDC113-203ENST00000561517 DEFA5Q01523 94 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 ZNF45Q02386 682 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
CCDC113-203ENST00000561517 SPCS2Q15005 226 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
CCDC113-203ENST00000561517 ANKRD34BA5PLL1 514 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 HMX3A6NHT5 357 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 FAM223BA6NKX1 122 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 GPR31O00270 319 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 S1PR2O95136 353 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 FGF2P09038 288 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 HLA-GP17693 338 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 F2RP25116 425 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 RHOGP84095 191 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 CLVS1Q8IUQ0 354 aaPredicted RBP11.88□□□□□ -0.51
CCDC113-203ENST00000561517 FAM223AQ8IWN6 122 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 RAB2BQ8WUD1 216 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 BCL7BQ9BQE9 202 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 AKIP1Q9NQ31 210 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 EXTL2Q9UBQ6 330 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
CCDC113-203ENST00000561517 ZNF257Q9Y2Q1 563 aa11.88□□□□□ -0.51
CCDC113-203ENST00000561517 CGB1A6NKQ9 187 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 UPK2O00526 184 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 SAP30O75446 220 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 PRH1P02810 166 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 RLN1P04808 185 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 RPL5P46777 297 aaKnown RBP11.87□□□□□ -0.51
CCDC113-203ENST00000561517 TMBIM6P55061 237 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 UCP3P55916 312 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 TSPAN5P62079 268 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
CCDC113-203ENST00000561517 KLK9Q2XQG4 91 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 LPCAT3Q6P1A2 487 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 CADM3Q8N126 398 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 C15orf40Q8WUR7 153 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
CCDC113-203ENST00000561517 FYTTD1Q96QD9 318 aaKnown RBP11.87□□□□□ -0.51
CCDC113-203ENST00000561517 PRR25Q96S07 402 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 HRASLSQ9HDD0 168 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 KLK11Q9UBX7 282 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 KLK9Q9UKQ9 250 aa11.87□□□□□ -0.51
CCDC113-203ENST00000561517 ZNF256Q9Y2P7 627 aaPredicted RBP11.87□□□□□ -0.51
CCDC113-203ENST00000561517 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
CCDC113-203ENST00000561517 COL7A1Q02388 2944 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 TRBV12-3P01733 135 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 CRYGCP07315 174 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 MYOD1P15172 320 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 ATP5G2Q06055 141 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
CCDC113-203ENST00000561517 NECAP1Q8NC96 275 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms