RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 COX5AP20674 150 aa2.54□□□□□ -2
SPG11-225ENST00000561391 SERPINA2P20848 420 aa2.54□□□□□ -2
SPG11-225ENST00000561391 CCNOP22674 350 aa2.54□□□□□ -2
SPG11-225ENST00000561391 GABRR1P24046 479 aa2.54□□□□□ -2
SPG11-225ENST00000561391 MDH2P40926 338 aaKnown RBP2.54□□□□□ -2
SPG11-225ENST00000561391 HTR2BP41595 481 aa2.54□□□□□ -2
SPG11-225ENST00000561391 IER3P46695 156 aa2.54□□□□□ -2
SPG11-225ENST00000561391 KCNJ3P48549 501 aa2.54□□□□□ -2
SPG11-225ENST00000561391 RBM11P57052 281 aaKnown RBP2.54□□□□□ -2
SPG11-225ENST00000561391 FGF12P61328 243 aa2.54□□□□□ -2
SPG11-225ENST00000561391 HERV-K104P61576 105 aa2.54□□□□□ -2
SPG11-225ENST00000561391 GNB2P62879 340 aa2.54□□□□□ -2
SPG11-225ENST00000561391 NAAAQ02083 359 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PAX8Q06710 450 aa2.54□□□□□ -2
SPG11-225ENST00000561391 IL24Q13007 206 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PRDX4Q13162 271 aa2.54□□□□□ -2
SPG11-225ENST00000561391 SMCO1Q147U7 214 aa2.54□□□□□ -2
SPG11-225ENST00000561391 MICBQ29980 383 aa2.54□□□□□ -2
SPG11-225ENST00000561391 MOGAT2Q3SYC2 334 aa2.54□□□□□ -2
SPG11-225ENST00000561391 LGALSLQ3ZCW2 172 aaPredicted RBP2.54□□□□□ -2
SPG11-225ENST00000561391 ABCA11PQ4W5N1 156 aa2.54□□□□□ -2
SPG11-225ENST00000561391 TMEM255AQ5JRV8 349 aa2.54□□□□□ -2
SPG11-225ENST00000561391 C9orf152Q5JTZ5 239 aa2.54□□□□□ -2
SPG11-225ENST00000561391 FBXW12Q6X9E4 464 aa2.54□□□□□ -2
SPG11-225ENST00000561391 C18orf65Q6ZTR6 163 aa2.54□□□□□ -2
SPG11-225ENST00000561391 TMUB2Q71RG4 321 aa2.54□□□□□ -2
SPG11-225ENST00000561391 LHFPL1Q86WI0 220 aa2.54□□□□□ -2
SPG11-225ENST00000561391 NDUFA11Q86Y39 141 aa2.54□□□□□ -2
SPG11-225ENST00000561391 CMTM1Q8IZ96 169 aa2.54□□□□□ -2
SPG11-225ENST00000561391 SLC38A6Q8IZM9 456 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR8H3Q8N146 312 aa2.54□□□□□ -2
SPG11-225ENST00000561391 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
SPG11-225ENST00000561391 MAPKAPK5-AS1Q8N8E1 139 aa2.54□□□□□ -2
SPG11-225ENST00000561391 TMEM104Q8NE00 496 aa2.54□□□□□ -2
SPG11-225ENST00000561391 SLC30A7Q8NEW0 376 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR4D10Q8NGI6 311 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR5M8Q8NGP6 311 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR1K1Q8NGR3 316 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR13C8Q8NGS7 320 aa2.54□□□□□ -2
SPG11-225ENST00000561391 AKR7LQ8NHP1 331 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ANGPTL6Q8NI99 470 aa2.54□□□□□ -2
SPG11-225ENST00000561391 OR5P3Q8WZ94 311 aa2.54□□□□□ -2
SPG11-225ENST00000561391 RAB1CQ92928 201 aa2.54□□□□□ -2
SPG11-225ENST00000561391 GALNT14Q96FL9 552 aa2.54□□□□□ -2
SPG11-225ENST00000561391 POM121L2Q96KW2 1035 aa2.54□□□□□ -2
SPG11-225ENST00000561391 C2orf50Q96LR7 162 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ALKBH3Q96Q83 286 aaPredicted RBP2.54□□□□□ -2
SPG11-225ENST00000561391 CMSS1Q9BQ75 279 aaKnown RBP2.54□□□□□ -2
SPG11-225ENST00000561391 SEC22CQ9BRL7 303 aa2.54□□□□□ -2
SPG11-225ENST00000561391 NICN1Q9BSH3 213 aa2.54□□□□□ -2
SPG11-225ENST00000561391 RTL8AQ9BWD3 113 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PAPOLGQ9BWT3 736 aaKnown RBP2.54□□□□□ -2
SPG11-225ENST00000561391 PECRQ9BY49 303 aa2.54□□□□□ -2
SPG11-225ENST00000561391 BCL2L14Q9BZR8 327 aa2.54□□□□□ -2
SPG11-225ENST00000561391 MFFQ9GZY8 342 aa2.54□□□□□ -2
SPG11-225ENST00000561391 DNTTIP1Q9H147 329 aa2.54□□□□□ -2
SPG11-225ENST00000561391 BANF2Q9H503 90 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ZNF442Q9H7R0 627 aa2.54□□□□□ -2
SPG11-225ENST00000561391 METTL8Q9H825 291 aaKnown RBP2.54□□□□□ -2
SPG11-225ENST00000561391 EDA2RQ9HAV5 297 aa2.54□□□□□ -2
SPG11-225ENST00000561391 CDH20Q9HBT6 801 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ZNF286AQ9HBT8 521 aa2.54□□□□□ -2
SPG11-225ENST00000561391 RAB9BQ9NP90 201 aa2.54□□□□□ -2
SPG11-225ENST00000561391 GPR173Q9NS66 373 aa2.54□□□□□ -2
SPG11-225ENST00000561391 EHFQ9NZC4 300 aa2.54□□□□□ -2
SPG11-225ENST00000561391 PIPOXQ9P0Z9 390 aa2.54□□□□□ -2
SPG11-225ENST00000561391 MYEF2Q9P2K5 600 aaKnown RBP2.54□□□□□ -2
SPG11-225ENST00000561391 CACFD1Q9UGQ2 172 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ANXA10Q9UJ72 324 aa2.54□□□□□ -2
SPG11-225ENST00000561391 ST3GAL6Q9Y274 331 aa2.54□□□□□ -2
SPG11-225ENST00000561391 FXYD6-FXYD2A0A087WZ82 144 aa2.53□□□□□ -2
SPG11-225ENST00000561391 TRBV6-7A0A0A0MS04 114 aa2.53□□□□□ -2
SPG11-225ENST00000561391 A0A0A6YYD4 124 aa2.53□□□□□ -2
SPG11-225ENST00000561391 TRBV6-6A0A0A6YYG2 114 aa2.53□□□□□ -2
SPG11-225ENST00000561391 C13orf42A0A1B0GVH6 325 aa2.53□□□□□ -2
SPG11-225ENST00000561391 DUXBA0A1W2PPF3 345 aa2.53□□□□□ -2
SPG11-225ENST00000561391 A0A1W2PPI3 338 aa2.53□□□□□ -2
SPG11-225ENST00000561391 MEIS3P1A6NDR6 274 aa2.53□□□□□ -2
SPG11-225ENST00000561391 OR2AT4A6NND4 320 aa2.53□□□□□ -2
SPG11-225ENST00000561391 ZNF732B4DXR9 585 aa2.53□□□□□ -2
SPG11-225ENST00000561391 TRDCB7Z8K6 153 aa2.53□□□□□ -2
SPG11-225ENST00000561391 KRBOX1C9JBD0 128 aa2.53□□□□□ -2
SPG11-225ENST00000561391 TEX46H3BTG2 121 aa2.53□□□□□ -2
SPG11-225ENST00000561391 BMPR1BO00238 502 aa2.53□□□□□ -2
SPG11-225ENST00000561391 SH2D1BO14796 132 aa2.53□□□□□ -2
SPG11-225ENST00000561391 DEGS1O15121 323 aa2.53□□□□□ -2
SPG11-225ENST00000561391 ARPC5O15511 151 aa2.53□□□□□ -2
SPG11-225ENST00000561391 TSC22D2O75157 780 aa2.53□□□□□ -2
SPG11-225ENST00000561391 OR7C1O76099 320 aaPredicted RBP2.53□□□□□ -2
SPG11-225ENST00000561391 ATG12O94817 140 aa2.53□□□□□ -2
SPG11-225ENST00000561391 IGLV2-11P01706 119 aa2.53□□□□□ -2
SPG11-225ENST00000561391 CSN2P05814 226 aa2.53□□□□□ -2
SPG11-225ENST00000561391 FCGR3AP08637 254 aa2.53□□□□□ -2
SPG11-225ENST00000561391 PATE4P0C8F1 98 aa2.53□□□□□ -2
SPG11-225ENST00000561391 TPT1P13693 172 aaKnown RBP2.53□□□□□ -2
SPG11-225ENST00000561391 PGAM2P15259 253 aa2.53□□□□□ -2
SPG11-225ENST00000561391 PVALBP20472 110 aaPredicted RBP2.53□□□□□ -2
SPG11-225ENST00000561391 M6PRP20645 277 aa2.53□□□□□ -2
SPG11-225ENST00000561391 ACKR3P25106 362 aa2.53□□□□□ -2
SPG11-225ENST00000561391 MC5RP33032 325 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms