RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 H0YJW9 148 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 J3QRK9 145 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 NME4O00746 187 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 IGHV3-23P01764 117 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 MT-ND4P03905 459 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 CT45A6P0DMU7 189 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 CT45A5P0DMU8 189 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 CT45A7P0DMV0 189 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 MIFP14174 115 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 MALP21145 153 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 SLC2A5P22732 501 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 ARL3P36405 182 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 HOXA1P49639 335 aaPredicted RBP3.78□□□□□ -1.8
HERC1-213ENST00000561359 SSBP2P81877 361 aaPredicted RBP3.78□□□□□ -1.8
HERC1-213ENST00000561359 RSU1Q15404 277 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 RPL39P5Q59GN2 51 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 YIF1BQ5BJH7 314 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 ELP2Q6IA86 826 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 GLYATQ6IB77 296 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 ZNF497Q6ZNH5 498 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 NECAP1Q8NC96 275 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 OR2AK2Q8NG84 335 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 OR52L2PQ8NGH6 319 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 OR13C9Q8NGT0 318 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 OR5H6Q8NGV6 325 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 OR10AC1Q8NH08 325 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 OR4K15Q8NH41 348 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 TMEM163Q8TC26 289 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 LRRC20Q8TCA0 184 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 RAB2BQ8WUD1 216 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 PYURFQ96I23 114 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 CNN2Q99439 309 aaKnown RBP3.78□□□□□ -1.8
HERC1-213ENST00000561359 SULT4A1Q9BR01 284 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 ATG101Q9BSB4 218 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 THTPAQ9BU02 230 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 C9orf16Q9BUW7 83 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 MRPL27Q9P0M9 148 aaKnown RBP3.78□□□□□ -1.8
HERC1-213ENST00000561359 ZNF221Q9UK13 617 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 A0A0G2JND7 137 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 EFCAB10A6NFE3 127 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 CENPXA8MT69 81 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 ZNF670-ZNF695F2Z2N8 137 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 RAB29O14966 203 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 ARPC2O15144 300 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 TRIAP1O43715 76 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 MRPS14O60783 128 aaKnown RBP3.77□□□□□ -1.81
HERC1-213ENST00000561359 PROP1O75360 226 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 OR2J3O76001 311 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 PTTG1O95997 202 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 MT-ND2P03891 347 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 SEMG1P04279 462 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 IGKV1-16P04430 117 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 UBCP0CG48 685 aaKnown RBP3.77□□□□□ -1.81
HERC1-213ENST00000561359 C8orf88P0DMB2 117 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 MYOD1P15172 320 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 RCC1P18754 421 aaPredicted RBP3.77□□□□□ -1.81
HERC1-213ENST00000561359 NKX2-5P52952 324 aaPredicted RBP3.77□□□□□ -1.81
HERC1-213ENST00000561359 FAM3BP58499 235 aaPredicted RBP3.77□□□□□ -1.81
HERC1-213ENST00000561359 HTD2P86397 168 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 PPP1R8Q12972 351 aaKnown RBP3.77□□□□□ -1.81
HERC1-213ENST00000561359 GINS1Q14691 196 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 KISS1Q15726 138 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 ZNF691Q5VV52 312 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 UBE2UQ5VVX9 321 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 FAM71F2Q6NXP2 309 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 CLEC19AQ6UXS0 136 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 STX12Q86Y82 276 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 SLC35F2Q8IXU6 374 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 C15orf53Q8NAA6 179 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 OR6F1Q8NGZ6 308 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 PYDC1Q8WXC3 89 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 FAM210BQ96KR6 192 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 GPER1Q99527 375 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 DCUN1D5Q9BTE7 237 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 TAF9BQ9HBM6 251 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 ADGRL4Q9HBW9 690 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 KCNIP1Q9NZI2 227 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 PIPOXQ9P0Z9 390 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 JPT1Q9UK76 154 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 ST3GAL6Q9Y274 331 aa3.77□□□□□ -1.81
HERC1-213ENST00000561359 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 A0A1B0GW64 132 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 CCDC182A6NF36 153 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 PCP4L1A6NKN8 68 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 C15orf61A6NNL5 157 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 LINC00473A8K010 186 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 CTDSP2O14595 271 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 GEMIN2O14893 280 aaKnown RBP3.76□□□□□ -1.81
HERC1-213ENST00000561359 SSX5O60225 188 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 YPEL1O60688 119 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 TSC22D2O75157 780 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 CLN5O75503 358 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 CCNKO75909 580 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 MAS1P04201 325 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 PRB4P10163 310 aaPredicted RBP3.76□□□□□ -1.81
HERC1-213ENST00000561359 HTN3P15516 51 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
HERC1-213ENST00000561359 HTR2BP41595 481 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 TFPI2P48307 235 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms