RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 HPRT1P00492 218 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 TRGV3P03979 118 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 TPPP2P59282 170 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 OR4A5Q8NH83 315 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 FCAMRQ8WWV6 532 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 USMG5Q96IX5 58 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 RHOVQ96L33 236 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 MS4A10Q96PG2 267 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
LMX1B-204ENST00000561065 EXTL2Q9UBQ6 330 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 ANAPC10Q9UM13 185 aa12.31□□□□□ -0.44
LMX1B-204ENST00000561065 DPPA5A6NC42 116 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 LINC01619G3V211 115 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 OVOL1O14753 267 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 DHFRP00374 187 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 IGLV2-14P01704 120 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 TBPP20226 339 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 HLA-DMAP28067 261 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 INSL3P51460 131 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 TAS2R31P59538 309 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 RPL30P62888 115 aaKnown RBP12.3□□□□□ -0.44
LMX1B-204ENST00000561065 DEFA5Q01523 94 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 MOB3AQ96BX8 217 aa12.3□□□□□ -0.44
LMX1B-204ENST00000561065 ZNF256Q9Y2P7 627 aaPredicted RBP12.3□□□□□ -0.44
LMX1B-204ENST00000561065 HSPB1P04792 205 aaKnown RBP12.29□□□□□ -0.44
LMX1B-204ENST00000561065 SAA1P0DJI8 122 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-204ENST00000561065 NQO2P16083 231 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 HRH1P35367 487 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 ERVK-16P61578 105 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
LMX1B-204ENST00000561065 TATDN3Q17R31 274 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 OR2B11Q5JQS5 317 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 LYSMD2Q8IV50 215 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 SRSF12Q8WXF0 261 aaKnown RBP12.29□□□□□ -0.44
LMX1B-204ENST00000561065 PLEKHA2Q9HB19 425 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 RANGRFQ9HD47 186 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-204ENST00000561065 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
LMX1B-204ENST00000561065 GPR31O00270 319 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 TNFSF12O43508 249 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 OR9G9P0C7N8 305 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 GNRHRP30968 328 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 ZNF818PQ6ZRF7 136 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 TMEM167AQ8TBQ9 72 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 ZNF430Q9H8G1 570 aaPredicted RBP12.28□□□□□ -0.44
LMX1B-204ENST00000561065 HRASLSQ9HDD0 168 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 BET1LQ9NYM9 111 aa12.28□□□□□ -0.44
LMX1B-204ENST00000561065 RYR3Q15413 4870 aa12.27□□□□□ -0.44
LMX1B-204ENST00000561065 CYB5BO43169 146 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 KBTBD11O94819 623 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 FGF2P09038 288 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 ZP3P21754 424 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 F2RP25116 425 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 UCP3P55916 312 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 RPL8P62917 257 aaKnown RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 EIF4EBP1Q13541 118 aaPredicted RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 RNASE10Q5GAN6 216 aaKnown RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 IDO2Q6ZQW0 420 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 DMBX1Q8NFW5 382 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 TINAGL1Q9GZM7 467 aaPredicted RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 FAM212BQ9NTI7 297 aaPredicted RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 COMMD9Q9P000 198 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 CCDC59Q9P031 241 aaKnown RBP12.27□□□□□ -0.45
LMX1B-204ENST00000561065 TENM3Q9P273 2699 aa12.27□□□□□ -0.45
LMX1B-204ENST00000561065 STAB2Q8WWQ8 2551 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 GABARAPH6UMI1 98 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 SAP30O75446 220 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 PGLYRP1O75594 196 aaPredicted RBP12.26□□□□□ -0.45
LMX1B-204ENST00000561065 APELAP0DMC3 54 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 RPL27AP46776 148 aaKnown RBP12.26□□□□□ -0.45
LMX1B-204ENST00000561065 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 HAPLN4Q86UW8 402 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 ZNF429Q86V71 674 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 SLC38A6Q8IZM9 456 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 PUSL1Q8N0Z8 303 aaKnown RBP12.26□□□□□ -0.45
LMX1B-204ENST00000561065 ARRDC1Q8N5I2 433 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 OR51H1Q8NH63 302 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 DGCR14Q96DF8 476 aaKnown RBP12.26□□□□□ -0.45
LMX1B-204ENST00000561065 DIRAS2Q96HU8 199 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 ELOVL1Q9BW60 279 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 COMMD5Q9GZQ3 224 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 MTFP1Q9UDX5 166 aa12.26□□□□□ -0.45
LMX1B-204ENST00000561065 CCDC160A6NGH7 325 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 SNAPC5O75971 98 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 LY86O95711 162 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 SPNP16150 400 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 TAS2R19P59542 299 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 SPCS2Q15005 226 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 THOC7Q6I9Y2 204 aaKnown RBP12.25□□□□□ -0.45
LMX1B-204ENST00000561065 SSX9Q7RTT3 188 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 FAM223AQ8IWN6 122 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 CADM3Q8N126 398 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 TTC9CQ8N5M4 171 aa12.25□□□□□ -0.45
LMX1B-204ENST00000561065 ZFAND1Q8TCF1 268 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms