RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SEC11BP0C7V7 166 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 PLA2G2AP14555 144 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 HTR1DP28221 377 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 RPS16P62249 146 aaKnown RBP13.86□□□□□ -0.19
HDDC3-206ENST00000561036 LCN2P80188 198 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 TPTE2P1Q5T6R2 138 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 HCP5Q6MZN7 132 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 RNF141Q8WVD5 230 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 TMED6Q8WW62 240 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 RNF5Q99942 180 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 MS4A7Q9GZW8 240 aaPredicted RBP13.86□□□□□ -0.19
HDDC3-206ENST00000561036 SIRPDQ9H106 197 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 HIPK2Q9H2X6 1198 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 TCF19Q9Y242 345 aa13.86□□□□□ -0.19
HDDC3-206ENST00000561036 UBR5O95071 2799 aaPredicted RBP13.86□□□□□ -0.19
HDDC3-206ENST00000561036 OOSP1A8MZH6 123 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 J3QKU1 62 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 FGF16O43320 207 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 KBTBD11O94819 623 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 SAA1P0DJI8 122 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-206ENST00000561036 USF1P22415 310 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-206ENST00000561036 S100A1P23297 94 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 TMEM267Q0VDI3 215 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-206ENST00000561036 ATP6V1FQ16864 119 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 MINOS1Q5TGZ0 78 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 TMEM167AQ8TBQ9 72 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 SIRT7Q9NRC8 400 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 MINOS1-NBL1R4GNA1 71 aa13.85□□□□□ -0.19
HDDC3-206ENST00000561036 METTL15P1P0C7V9 234 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 SPP1P10451 314 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 VDAC2P45880 294 aaPredicted RBP13.84□□□□□ -0.19
HDDC3-206ENST00000561036 DVL1P1P54792 670 aaPredicted RBP13.84□□□□□ -0.19
HDDC3-206ENST00000561036 DLX1P56177 255 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 CLINT1Q14677 625 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 VMA21Q3ZAQ7 101 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 FAM74A1Q5RGS3 127 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 MOB3BQ86TA1 216 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 TMEM217Q8N7C4 229 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 OR5B3Q8NH48 314 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 ZDHHC16Q969W1 377 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 GNPNAT1Q96EK6 184 aaPredicted RBP13.84□□□□□ -0.19
HDDC3-206ENST00000561036 OR4C12Q96R67 309 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 PARD6GQ9BYG4 376 aaPredicted RBP13.84□□□□□ -0.19
HDDC3-206ENST00000561036 OR51B2Q9Y5P1 312 aa13.84□□□□□ -0.19
HDDC3-206ENST00000561036 IFNA5P01569 189 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 IGLV2-23P01705 113 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 FAM157CP0CG43 387 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 SULT1A2P50226 295 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 ATP5IP56385 69 aaPredicted RBP13.83□□□□□ -0.2
HDDC3-206ENST00000561036 HAPLN4Q86UW8 402 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 TEX45Q8NA69 505 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 PINX1Q96BK5 328 aaKnown RBP13.83□□□□□ -0.2
HDDC3-206ENST00000561036 SAT2Q96F10 170 aaPredicted RBP13.83□□□□□ -0.2
HDDC3-206ENST00000561036 ENY2Q9NPA8 101 aa13.83□□□□□ -0.2
HDDC3-206ENST00000561036 HEYLQ9NQ87 328 aaPredicted RBP13.83□□□□□ -0.2
HDDC3-206ENST00000561036 MYO18BQ8IUG5 2567 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 LRBAP50851 2863 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 IGHV4-61A0A0C4DH41 118 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 A0A1W2PPI3 338 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 TOX4O94842 621 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 OR8U8P0C7N1 319 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 SLC25A16P16260 332 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 HOXB4P17483 251 aaPredicted RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 CD1BP29016 333 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 HOXA1P49639 335 aaPredicted RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 RAB5CP51148 216 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 RPL8P62917 257 aaKnown RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 PRCDQ00LT1 54 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 SLC38A11Q08AI6 406 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 HABP2Q14520 560 aaPredicted RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 ZNF787Q6DD87 383 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 CCDC144NLQ6NUI1 221 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 PCNPQ8WW12 178 aaKnown RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 PERPQ96FX8 193 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 MMP26Q9NRE1 261 aa13.82□□□□□ -0.2
HDDC3-206ENST00000561036 TBL2Q9Y4P3 447 aaKnown RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
HDDC3-206ENST00000561036 FLNCQ14315 2725 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 C15orf62A8K5M9 175 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 PMS2P5A8MQ11 134 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 RNASEK-C17orf49H0YIS7 233 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 UBE2E1P51965 193 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
HDDC3-206ENST00000561036 ARL16Q0P5N6 197 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 KLRD1Q13241 179 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 COMMD7Q86VX2 200 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 OR10P1Q8NGE3 313 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 OR1L8Q8NGR8 309 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 BEX4Q9NWD9 120 aaPredicted RBP13.81□□□□□ -0.2
HDDC3-206ENST00000561036 PFDN2Q9UHV9 154 aa13.81□□□□□ -0.2
HDDC3-206ENST00000561036 IGHV4-30-2A0A087WSY4 118 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 FAM157AC9JC47 383 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 INS-IGF2F8WCM5 200 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 FBXO24O75426 580 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 LGALS4P56470 323 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 RAB11AP62491 216 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms