RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 KCNK7Q9Y2U2 307 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 PRELID3BQ9Y3B1 194 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 IFNA4P05014 189 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 CTRB1P17538 263 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 RPL27AP46776 148 aaKnown RBP13.69□□□□□ -0.22
TPM1-226ENST00000560959 PRR20EP86478 221 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 PRR20CP86479 221 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 PRR20DP86480 221 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 PRR20BP86481 221 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 PRR20AP86496 221 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 ARFRP1Q13795 201 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 CTRB2Q6GPI1 263 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 H1FOOQ8IZA3 346 aaPredicted RBP13.69□□□□□ -0.22
TPM1-226ENST00000560959 OR2A7Q96R45 310 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 MAP6D1Q9H9H5 199 aa13.69□□□□□ -0.22
TPM1-226ENST00000560959 MRPS7Q9Y2R9 242 aaKnown RBP13.69□□□□□ -0.22
TPM1-226ENST00000560959 E7EUB6 86 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 FCGR3BO75015 233 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 LAMTOR1Q6IAA8 161 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 Q6ZS49 121 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 LINC00336Q6ZUF6 198 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 TMEM167AQ8TBQ9 72 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 FBLIM1Q8WUP2 373 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 GFI1Q99684 422 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 ZNF436Q9C0F3 470 aaPredicted RBP13.68□□□□□ -0.22
TPM1-226ENST00000560959 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
TPM1-226ENST00000560959 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 DENRO43583 198 aaKnown RBP13.67□□□□□ -0.22
TPM1-226ENST00000560959 SLC22A5O76082 557 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 KBTBD11O94819 623 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 MED22Q15528 200 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 RAB11BQ15907 218 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 AHSA2Q719I0 299 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 PUSL1Q8N0Z8 303 aaKnown RBP13.67□□□□□ -0.22
TPM1-226ENST00000560959 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 C11orf45Q8TAV5 145 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 CYGBQ8WWM9 190 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 FAM3DQ96BQ1 224 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 RAB3CQ96E17 227 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 C11orf68Q9H3H3 251 aaKnown RBP13.67□□□□□ -0.22
TPM1-226ENST00000560959 RAB22AQ9UL26 194 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 S4R3C0 116 aa13.67□□□□□ -0.22
TPM1-226ENST00000560959 A0A1B0GW64 132 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 MED14OSP0DP75 135 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 IRF3Q14653 427 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 RBMS2Q15434 407 aaKnown RBP13.66□□□□□ -0.22
TPM1-226ENST00000560959 LAIR2Q6ISS4 152 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 C2CD4CQ8TF44 421 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 FKBP14Q9NWM8 211 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 FAT2Q9NYQ8 4349 aa13.66□□□□□ -0.22
TPM1-226ENST00000560959 PKHD1P08F94 4074 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 DEFA4P12838 97 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 AREGP15514 252 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 PSMD7P51665 324 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 PLET1Q6UQ28 207 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 VKORC1L1Q8N0U8 176 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 DHRSXQ8N5I4 330 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 ZNF502Q8TBZ5 544 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 RARRES2Q99969 163 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 MND1Q9BWT6 205 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
TPM1-226ENST00000560959 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 C8orf4Q9NR00 106 aa13.65□□□□□ -0.22
TPM1-226ENST00000560959 MFSD2BA6NFX1 497 aa13.64□□□□□ -0.23
TPM1-226ENST00000560959 OR4C46A6NHA9 309 aa13.64□□□□□ -0.23
TPM1-226ENST00000560959 CD36P16671 472 aa13.64□□□□□ -0.23
TPM1-226ENST00000560959 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
TPM1-226ENST00000560959 PTBP1P26599 531 aaKnown RBP eCLIP13.64□□□□□ -0.237e-7■■■□□ 17
TPM1-226ENST00000560959 ADMP35318 185 aa13.64□□□□□ -0.23
TPM1-226ENST00000560959 NANOS2P60321 138 aaKnown RBP13.64□□□□□ -0.23
TPM1-226ENST00000560959 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
TPM1-226ENST00000560959 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
TPM1-226ENST00000560959 THYN1Q9P016 225 aa13.64□□□□□ -0.23
TPM1-226ENST00000560959 RBMX2Q9Y388 322 aaKnown RBP13.64□□□□□ -0.23
TPM1-226ENST00000560959 AK6Q9Y3D8 172 aaKnown RBP13.64□□□□□ -0.23
TPM1-226ENST00000560959 ARL6IP5O75915 188 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 HLA-DQB1P01920 261 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 FCGR2BP31994 310 aaPredicted RBP13.63□□□□□ -0.23
TPM1-226ENST00000560959 GPR183P32249 361 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 CMC4P56277 68 aaPredicted RBP13.63□□□□□ -0.23
TPM1-226ENST00000560959 RPL30P62888 115 aaKnown RBP13.63□□□□□ -0.23
TPM1-226ENST00000560959 RPL8P62917 257 aaKnown RBP13.63□□□□□ -0.23
TPM1-226ENST00000560959 SPHARQ15513 63 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 OR10R2Q8NGX6 335 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 TMEM190Q8WZ59 177 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 HSD17B10Q99714 261 aaKnown RBP13.63□□□□□ -0.23
TPM1-226ENST00000560959 OR2W1Q9Y3N9 320 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 DNAH2Q9P225 4427 aa13.63□□□□□ -0.23
TPM1-226ENST00000560959 TMEM272A0A1B0GTI8 110 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 MPTX1A8MV57 137 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 MFNGO00587 321 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 IGLV2-14P01704 120 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 CTXN2P0C2S0 81 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 GADD45AP24522 165 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 CLDN12P56749 244 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 TMEM91Q6ZNR0 172 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms