RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 MFFQ9GZY8 342 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 FBXL17Q9UF56 701 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 ZNF257Q9Y2Q1 563 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 KCNK7Q9Y2U2 307 aa13.24□□□□□ -0.29
TSPAN3-208ENST00000560514 KIR2DL5BA0A0G2JN68 375 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 KIR2DL5BA0A0G2JPC4 375 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 TMEM272A0A1B0GTI8 110 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 A8MWP6 167 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 CD3GP09693 182 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 RAB6AP20340 208 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 GADD45AP24522 165 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 CLDN12P56749 244 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 ARL6IP1Q15041 203 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 RBMS2Q15434 407 aaKnown RBP13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 KIR2DL5AQ8N109 375 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 KIR2DL5BQ8NHK3 375 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 ADTRPQ96IZ2 230 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 UBQLN2Q9UHD9 624 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
TSPAN3-208ENST00000560514 TRBV6-7A0A0A0MS04 114 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 TRDV1A0A1B0GX56 115 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 METTL21EPA6NDL7 271 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 IFITM5A6NNB3 132 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 FABP7O15540 132 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 MED14OSP0DP75 135 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 Q6ZS49 121 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 OR10R2Q8NGX6 335 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 OR10J5Q8NHC4 309 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 OSR1Q8TAX0 266 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 EEF1AKMT3Q96AZ1 226 aa13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-208ENST00000560514 RAB27BO00194 218 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 BET1O15155 118 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 DHFRP00374 187 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 TCTAP57738 103 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 PRR20EP86478 221 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 PRR20CP86479 221 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 PRR20DP86480 221 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 PRR20BP86481 221 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 PRR20AP86496 221 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 SSX1Q16384 188 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 ZNF585BQ52M93 769 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 HES5Q5TA89 166 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 LINC00336Q6ZUF6 198 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 C11orf45Q8TAV5 145 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 DCUN1D5Q9BTE7 237 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 CABLES2Q9BTV7 478 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 NDUFB11Q9NX14 153 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 RAB26Q9ULW5 256 aa13.21□□□□□ -0.29
TSPAN3-208ENST00000560514 MUC4Q99102 2169 aa13.21□□□□□ -0.3
TSPAN3-208ENST00000560514 FCGR3AP08637 254 aa13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 MYL9P24844 172 aa13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 CDK10Q15131 360 aa13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 C10orf55Q5SWW7 151 aa13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 S4R3C0 116 aa13.2□□□□□ -0.3
TSPAN3-208ENST00000560514 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 MFNGO00587 321 aa13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 HIST1H1DP16402 221 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 RAB3BP20337 219 aa13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 IZUMO2Q6UXV1 221 aa13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 C6orf62Q9GZU0 229 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-208ENST00000560514 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 GNB3P16520 340 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 CTRB1P17538 263 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 TALDO1P37837 337 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 PLA2G7Q13093 441 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 FYTTD1Q96QD9 318 aaKnown RBP13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 VPS13DQ5THJ4 4388 aa13.18□□□□□ -0.3
TSPAN3-208ENST00000560514 XRCC3O43542 346 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 CTXN2P0C2S0 81 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 MYOD1P15172 320 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 DTYMKP23919 212 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 FGF9P31371 208 aaPredicted RBP13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 DUTP33316 252 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 OR10A3P58181 314 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 LAMTOR1Q6IAA8 161 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 RARRES2Q99969 163 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 GINS4Q9BRT9 223 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 C5orf66Q9H5L9 145 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
TSPAN3-208ENST00000560514 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 FCGR3BO75015 233 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 CLEC3BP05452 202 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms