RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 MRPS10P82664 201 aaKnown RBP6.27□□□□□ -1.41
LRRC28-219ENST00000560483 DGCR2P98153 550 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 NDPQ00604 133 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 PJVKQ0ZLH3 352 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 FOXE3Q13461 319 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 DEFB136Q30KP8 78 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 TCTEX1D4Q5JR98 221 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF562Q6V9R5 426 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 C18orf65Q6ZTR6 163 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 LYSMD2Q8IV50 215 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 MMD2Q8IY49 270 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 SLC38A6Q8IZM9 456 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 TEX45Q8NA69 505 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 RNASE11Q8TAA1 199 aaKnown RBP6.27□□□□□ -1.41
LRRC28-219ENST00000560483 DPF1Q92782 380 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 MOB3AQ96BX8 217 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 C20orf173Q96LM9 149 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 ABHD1Q96SE0 405 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 AIFM2Q9BRQ8 373 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 TINAGL1Q9GZM7 467 aaPredicted RBP6.27□□□□□ -1.41
LRRC28-219ENST00000560483 MIXL1Q9H2W2 232 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 MCUBQ9NWR8 336 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 RABL2AQ9UBK7 228 aaPredicted RBP6.27□□□□□ -1.41
LRRC28-219ENST00000560483 RABL2BQ9UNT1 228 aa6.27□□□□□ -1.41
LRRC28-219ENST00000560483 CMYA5Q8N3K9 4069 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 C13orf42A0A1B0GVH6 325 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 MSGN1A6NI15 193 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 SRRM4A7MD48 611 aaKnown RBP6.26□□□□□ -1.41
LRRC28-219ENST00000560483 RAMP3O60896 148 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 OR2A4O95047 310 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 IGLV2-23P01705 113 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 IGHV3-11P01762 117 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 NAT1P18440 290 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 RAB9AP51151 201 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 SPANXN2Q5MJ10 180 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 STEAP1BQ6NZ63 245 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 DHRS11Q6UWP2 260 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 TCTEX1D1Q8N7M0 179 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 OR5M8Q8NGP6 311 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 CD300LFQ8TDQ1 290 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 DDB2Q92466 427 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 RHOVQ96L33 236 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 OR2A7Q96R45 310 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 HINT2Q9BX68 163 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 FXYD6Q9H0Q3 95 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 COPZ2Q9P299 210 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 MTFP1Q9UDX5 166 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 C14orf166Q9Y224 244 aaKnown RBP6.26□□□□□ -1.41
LRRC28-219ENST00000560483 VSIG4Q9Y279 399 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 FBXO7Q9Y3I1 522 aa6.26□□□□□ -1.41
LRRC28-219ENST00000560483 CCL24O00175 119 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 ARPC1BO15143 372 aaKnown RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 PGLYRP1O75594 196 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SNAPC5O75971 98 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 KBTBD11O94819 623 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 S1PR2O95136 353 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 HPRT1P00492 218 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 IGLV2-14P01704 120 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 IGHG4P01861 327 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SERPINE2P07093 398 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 AKAIN1P0CW23 69 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 DEFA4P12838 97 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 NQO2P16083 231 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 PI3P19957 117 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 TBPP20226 339 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 GNRHRP30968 328 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 TNFSF8P32971 234 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 LPAR6P43657 344 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 RPL27AP46776 148 aaKnown RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 MECP2P51608 486 aaKnown RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 DEFA6Q01524 100 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 MEF2DQ14814 521 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 MSMO1Q15800 293 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 PRSS8Q16651 343 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 TRIM16LQ309B1 348 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 VAX1Q5SQQ9 334 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 FAAP20Q6NZ36 180 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 TBC1D26Q86UD7 250 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 CCDC71LQ8N9Z2 235 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 TMEM229BQ8NBD8 167 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 OR11H1Q8NG94 326 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 WIPF2Q8TF74 440 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SMIM4Q8WVI0 70 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SRSF12Q8WXF0 261 aaKnown RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 DGCR14Q96DF8 476 aaKnown RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SPIN2AQ99865 258 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SPIN2BQ9BPZ2 258 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 COMMD5Q9GZQ3 224 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 SLIRPQ9GZT3 109 aaKnown RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 KLK15Q9H2R5 256 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF430Q9H8G1 570 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-219ENST00000560483 ANAPC10Q9UM13 185 aa6.25□□□□□ -1.41
LRRC28-219ENST00000560483 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TEX13DA0A0J9YY54 714 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-219ENST00000560483 ANKRD34BA5PLL1 514 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 G3V4G9 280 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TPPPO94811 219 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 KRASP01116 189 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 IGLL1P15814 213 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 F2RP25116 425 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms