RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 HMGN3Q15651 99 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 Q3ZCU0 254 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 PHLDA2Q53GA4 152 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 LAMTOR1Q6IAA8 161 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 C11orf87Q6NUJ2 197 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 SLC35E3Q7Z769 313 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 ZNF546Q86UE3 836 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 C8orf31Q8N9H6 132 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 OR8H1Q8NGG4 311 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 OR52M1Q8NGK5 317 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 IL1F10Q8WWZ1 152 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 GALMQ96C23 342 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 SPIN2AQ99865 258 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 SPIN2BQ9BPZ2 258 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 MFFQ9GZY8 342 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 MBNL3Q9NUK0 354 aaKnown RBP10.71□□□□□ -0.69
SMAD3-214ENST00000560402 OR2W1Q9Y3N9 320 aa10.71□□□□□ -0.69
SMAD3-214ENST00000560402 DUXBA0A1W2PPF3 345 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 WI2-2373I1.2A0A1W2PRP0 233 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 NUDT19A8MXV4 375 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 AP4M1O00189 453 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 MPPED1O15442 326 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 SPINT2O43291 252 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 RLN2P04090 185 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 GAPDHP04406 335 aaKnown RBP10.7□□□□□ -0.7
SMAD3-214ENST00000560402 GZMHP20718 246 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 OR2F1Q13607 317 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 ZNF345Q14585 488 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 OPCMLQ14982 345 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 ANKRD55Q3KP44 614 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 LGALSLQ3ZCW2 172 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-214ENST00000560402 UTF1Q5T230 341 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 ZNF329Q86UD4 541 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 TGIF2LXQ8IUE1 241 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 H1FOOQ8IZA3 346 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-214ENST00000560402 STPG2Q8N412 459 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 LINC00311Q8N616 119 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 LRTM2Q8N967 370 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 KLHL30-AS1Q8NEE0 82 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 PPP1R1CQ8WVI7 109 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 LEAP2Q969E1 77 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 SEC22AQ96IW7 307 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 CYYR1Q96J86 154 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 TAF9BQ9HBM6 251 aa10.7□□□□□ -0.7
SMAD3-214ENST00000560402 LIN7CQ9NUP9 197 aaKnown RBP10.7□□□□□ -0.7
SMAD3-214ENST00000560402 IGHV1-3A0A0C4DH29 117 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 C3orf85A0A1B0GTC6 90 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 KANTRA0A1W2PQU2 76 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 G3V3Q6 166 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 TXNL1O43396 289 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 IGHV3-7P01780 117 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 HOXB5P09067 269 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 OR5AC1P0C628 307 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 RCC1P18754 421 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-214ENST00000560402 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-214ENST00000560402 RAB14P61106 215 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 CD69Q07108 199 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 LTC4SQ16873 150 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 LRRC37A5PQ49AS3 106 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 OR10V1Q8NGI7 309 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 OR2T10Q8NGZ9 312 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 RFESDQ8TAC1 157 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 WDR89Q96FK6 387 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-214ENST00000560402 NOL4LQ96MY1 436 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-214ENST00000560402 P2RX4Q99571 388 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 ARL6Q9H0F7 186 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 TMED3Q9Y3Q3 217 aa10.69□□□□□ -0.7
SMAD3-214ENST00000560402 DNAH9Q9NYC9 4486 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 ATP6V1G1O75348 118 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 MPC2O95563 127 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 DIAPH2-AS1Q14236 149 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 TMEM187Q14656 261 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 IAH1Q2TAA2 248 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-214ENST00000560402 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
SMAD3-214ENST00000560402 TEX38Q6PEX7 206 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 ACOT7LQ6ZUV0 252 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 TMUB2Q71RG4 321 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 TBC1D26Q86UD7 250 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 ZNF695Q8IW36 515 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 PRR18Q8N4B5 295 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 Q8N6K4 173 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 ZBTB34Q8NCN2 500 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 IL22RA2Q969J5 263 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 GFOD1Q9NXC2 390 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 RDH8Q9NYR8 311 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 UBQLN2Q9UHD9 624 aa10.68□□□□□ -0.7
SMAD3-214ENST00000560402 H0Y980 276 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 C15orf65H3BRN8 121 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 ADAP1O75689 374 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 CD1BP29016 333 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 GPR12P47775 334 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 ZNF137PP52743 207 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 HNF4GQ14541 408 aa10.67□□□□□ -0.7
SMAD3-214ENST00000560402 MSMO1Q15800 293 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms