RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 NFAM1Q8NET5 270 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 FAM216AQ8WUB2 273 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 RDH5Q92781 318 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 APOBEC3DQ96AK3 386 aaPredicted RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 BORCS7Q96B45 105 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 QTRT1Q9BXR0 403 aaKnown RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 NPCDR1Q9BY65 106 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 ULBP2Q9BZM5 246 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 MTIF3Q9H2K0 278 aaKnown RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CST9LQ9H4G1 147 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 ST20Q9HBF5 79 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 OSTCQ9NRP0 149 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 KCNIP1Q9NZI2 227 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 WDR83OSQ9Y284 106 aa4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 CHD3Q12873 2000 aaKnown RBP4.97□□□□□ -1.61
SNRPA1-209ENST00000560307 ARHGEF17Q96PE2 2063 aaPredicted RBP4.96□□□□□ -1.61
SNRPA1-209ENST00000560307 PCNTO95613 3336 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 IGLV3-12A0A075B6K2 115 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 IGKV1-6A0A0C4DH72 117 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 A0A1B0GUS0 222 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 A0A1B0GX78 115 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 A0A1W2PRS3 328 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 A0A1W2PS18 150 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 A1L4Q6 167 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 NPIPA3F8WFD2 350 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 G3V3Y1 287 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 FCN1O00602 326 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 RBFOX2O43251 390 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 TRAPPC6AO75865 159 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 NDUFB4O95168 129 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 LINC00869P0C866 280 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 C3orf79P0CE67 100 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 STAG3L2P0CL84 134 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 STAG3L3P0CL85 134 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 TNFRSF1AP19438 455 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 CBLN1P23435 193 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 NPY1RP25929 384 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 OPRK1P41145 380 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 CLDN18P56856 261 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 CX3CL1P78423 397 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 MRPS21P82921 87 aaKnown RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 KLF5Q13887 457 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 HLA-BQ31612 363 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 NRN1LQ496H8 165 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 ZNF585BQ52M93 769 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 ETFRF1Q6IPR1 90 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 WDR74Q6RFH5 385 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 UNQ5815/PRO19632Q6UWF5 114 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 TMEM136Q6ZRR5 245 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 TCF23Q7RTU1 214 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 NIT1Q86X76 327 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 KMT5CQ86Y97 462 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 SLC22A18ASQ8N1D0 253 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 OR10G3Q8NGC4 313 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 OR51H1Q8NH63 302 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 OR2AE1Q8NHA4 323 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 WIPF2Q8TF74 440 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 NPIPB3Q92617 1050 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 SPACA9Q96E40 222 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 UHRF2Q96PU4 802 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 OR6C1Q96RD1 312 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 PMCHL2Q9BQD1 86 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 VPS25Q9BRG1 176 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 PHF7Q9BWX1 381 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 RBM24Q9BX46 236 aaKnown RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 C1QTNF5Q9BXJ0 243 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 GNB4Q9HAV0 340 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 HES4Q9HCC6 221 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 TUBG2Q9NRH3 451 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 KLRF1Q9NZS2 232 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 CLN8Q9UBY8 286 aa4.96□□□□□ -1.62
SNRPA1-209ENST00000560307 IGHV5-51A0A0C4DH38 117 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 A0A1W2PPV4 95 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 MBD3L5A6NJ08 208 aaPredicted RBP4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 SH2D7A6NKC9 451 aaPredicted RBP4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 LRRC30A6NM36 301 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 B4DGG1 531 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 TMEM238C9JI98 176 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 H0YJW9 148 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 TRAPPC2LH3BP13 241 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 NKX2-8O15522 239 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 CD5LO43866 347 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 NXPH3O95157 252 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 CLDN1O95832 211 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 CA2P00918 260 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 IGLV3-19P01714 112 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 NBEAP1P0C6P0 100 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 SCGB1A1P11684 91 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 ATP5G3P48201 142 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 SELENOVP59797 346 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 HTD2P86397 168 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 PSG4Q00888 419 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 CATR1Q13166 79 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 VAMP3Q15836 100 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 RTL8BQ17RB0 113 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 ZNF718Q3SXZ3 478 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 KRTCAP3Q53RY4 240 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 KIAA2026Q5HYC2 2103 aa4.95□□□□□ -1.62
SNRPA1-209ENST00000560307 PHYHD1Q5SRE7 291 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms