RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 F2RL1P55085 397 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 TAS2R31P59538 309 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 PJVKQ0ZLH3 352 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 CATR1Q13166 79 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 FOXE3Q13461 319 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 HES1Q14469 280 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 MRGPRG-AS1Q2M3A8 158 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 MIDNQ504T8 468 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 TMEM177Q53S58 311 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 TMEM128Q5BJH2 165 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 C10orf55Q5SWW7 151 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 MINOS1Q5TGZ0 78 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 GGNBP1Q5YKI7 109 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 LPCAT3Q6P1A2 487 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 ZNF66Q6ZN08 573 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 C19orf35Q6ZS72 473 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 SIGLECL1Q8N7X8 197 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 MINDY2Q8NBR6 621 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 OR11H7Q8NGC8 314 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 OR5AN1Q8NGI8 311 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 PIFOQ8TCI5 191 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 HARBI1Q96MB7 349 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 HSD17B10Q99714 261 aaKnown RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 CHIAQ9BZP6 476 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 MS4A7Q9GZW8 240 aaPredicted RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 TMEM222Q9H0R3 208 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 FBXL15Q9H469 300 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 LIN7CQ9NUP9 197 aaKnown RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 MGAT4CQ9UBM8 478 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 TBL2Q9Y4P3 447 aaKnown RBP4.16□□□□□ -1.74
SPG11-220ENST00000559933 MINOS1-NBL1R4GNA1 71 aa4.16□□□□□ -1.74
SPG11-220ENST00000559933 C13orf42A0A1B0GVH6 325 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 MARCH11A6NNE9 402 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 HOXA3O43365 443 aaPredicted RBP4.15□□□□□ -1.75
SPG11-220ENST00000559933 SLC25A17O43808 307 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 PRAF2O60831 178 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 DUS4LO95620 317 aaKnown RBP4.15□□□□□ -1.75
SPG11-220ENST00000559933 SCGB1D2O95969 90 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 DHFRP00374 187 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 KRASP01116 189 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 OPN1MWP04001 364 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 SERPINE2P07093 398 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 APELAP0DMC3 54 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 OPN1MW2P0DN77 364 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 OPN1MW3P0DN78 364 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 TMEM11P17152 192 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 CEACAM3P40198 252 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 H2BFSP57053 126 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 RPS16P62249 146 aaKnown RBP4.15□□□□□ -1.75
SPG11-220ENST00000559933 GNB1P62873 340 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 NDPQ00604 133 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 DEFA5Q01523 94 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 MMDQ15546 238 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 MSMO1Q15800 293 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 HIST2H2BDQ6DRA6 164 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 FAM71F2Q6NXP2 309 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 Q6ZRM9 215 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 PDPNQ86YL7 162 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 ZNF695Q8IW36 515 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 C12orf45Q8N5I9 185 aaPredicted RBP4.15□□□□□ -1.75
SPG11-220ENST00000559933 Q8N6K4 173 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 ZBTB34Q8NCN2 500 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 OR4S2Q8NH73 311 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 NANPQ8TBE9 248 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 MITD1Q8WV92 249 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 GPR146Q96CH1 333 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 R3HDM4Q96D70 268 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 MALSU1Q96EH3 234 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 GALNT14Q96FL9 552 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 SEC22AQ96IW7 307 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 OR10C1Q96KK4 312 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 SCGB3A2Q96PL1 93 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 SSX3Q99909 188 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 ALX4Q9H161 411 aaPredicted RBP4.15□□□□□ -1.75
SPG11-220ENST00000559933 ESM1Q9NQ30 184 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 TMEM140Q9NV12 185 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 AURKAIP1Q9NWT8 199 aaPredicted RBP4.15□□□□□ -1.75
SPG11-220ENST00000559933 CACNG5Q9UF02 275 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 GAB2Q9UQC2 676 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 PRELID3BQ9Y3B1 194 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 WASHC3Q9Y3C0 194 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 FAM96BQ9Y3D0 163 aa4.15□□□□□ -1.75
SPG11-220ENST00000559933 TET2Q6N021 2002 aaPredicted RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 A0A1B0GW64 132 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 FAM90A9PA6NNJ1 464 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 RNF212BA8MTL3 300 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 SNRPGP15A8MWD9 76 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 E7EUB6 86 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 FCN1O00602 326 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 KCNAB3O43448 404 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 SLC22A5O76082 557 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 OR2F2O95006 317 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 CDS2O95674 445 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 HPRT1P00492 218 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 MOSP00540 346 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 FBP1P09467 338 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 P0C879 139 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 SULT1A3P0DMM9 295 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 SULT1A4P0DMN0 295 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms