RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 OR2J3O76001 311 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 ATP6V1G2O95670 118 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 MXD1Q05195 221 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 CATR1Q13166 79 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 ZNF773Q6PK81 442 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 VKORC1L1Q8N0U8 176 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 PUSL1Q8N0Z8 303 aaKnown RBP9.32□□□□□ -0.92
SPG11-219ENST00000559822 MFSD4AQ8N468 514 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 OR4A5Q8NH83 315 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 FYTTD1Q96QD9 318 aaKnown RBP9.32□□□□□ -0.92
SPG11-219ENST00000559822 THAP7Q9BT49 309 aaPredicted RBP9.32□□□□□ -0.92
SPG11-219ENST00000559822 DIABLOQ9NR28 239 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 SLC2A9Q9NRM0 540 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 SLC2A8Q9NY64 477 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 TRAV18A0A075B6X5 111 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 LOC100506127A0A0U1RQW1 187 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 HMX3A6NHT5 357 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 TEX22C9J3V5 150 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
SPG11-219ENST00000559822 GGCTO75223 188 aaKnown RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 TPPPO94811 219 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 ZNF735P0CB33 412 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 HIST1H1BP16401 226 aaKnown RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 FCGR2CP31995 323 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 CBX5P45973 191 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 MECP2P51608 486 aaKnown RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 CD81P60033 236 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 RPL8P62917 257 aaKnown RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 HAGHQ16775 308 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 IDNKQ5T6J7 187 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 HOGA1Q86XE5 327 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 OR13F1Q8NGS4 319 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 SECTM1Q8WVN6 248 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 BORCS5Q969J3 196 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 TECRQ9NZ01 308 aaKnown RBP9.31□□□□□ -0.92
SPG11-219ENST00000559822 FBXL7Q9UJT9 491 aa9.31□□□□□ -0.92
SPG11-219ENST00000559822 LGALS9O00182 355 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 PPYP01298 95 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 CRYGCP07315 174 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 IL6RP08887 468 aaPredicted RBP9.3□□□□□ -0.92
SPG11-219ENST00000559822 DEFA4P12838 97 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 TIMM50Q3ZCQ8 353 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 CD300EQ496F6 205 aaPredicted RBP9.3□□□□□ -0.92
SPG11-219ENST00000559822 SSX9Q7RTT3 188 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 CROCCP3Q8IVE0 287 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 EEF1AKMT3Q96AZ1 226 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 SLC25A38Q96DW6 304 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 BET1LQ9NYM9 111 aa9.3□□□□□ -0.92
SPG11-219ENST00000559822 IZUMO1RA6ND01 250 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 PPP5D1E7EU14 171 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 TNFSF12O43508 249 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 HLA-GP17693 338 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 PSMB6P28072 239 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 ARL3P36405 182 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 TAS2R31P59538 309 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 FAM106AQ4KMX7 169 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 GPHB5Q86YW7 130 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 SPAG16Q8N0X2 631 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 OR5H6Q8NGV6 325 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 CD300LFQ8TDQ1 290 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 CXorf58Q96LI9 332 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 NEURL2Q9BR09 285 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 SLC5A7Q9GZV3 580 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 AUNIPQ9H7T9 357 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 EDA2RQ9HAV5 297 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 HRASLSQ9HDD0 168 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 CCL28Q9NRJ3 127 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 CEPT1Q9Y6K0 416 aa9.29□□□□□ -0.92
SPG11-219ENST00000559822 TRBV7-1A0A0A6YYK4 115 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 C2orf70A6NJV1 201 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 CYB5BO43169 146 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 OR2C1O95371 312 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 HPRT1P00492 218 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 FGF2P09038 288 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 CLEC2LP0C7M8 214 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 FOLR2P14207 255 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 NQO2P16083 231 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 CTRB1P17538 263 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 BRWD1-AS2P59051 145 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 FXYD4P59646 89 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 HERV-K104P61576 105 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 NEDD8Q15843 81 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 KLK9Q2XQG4 91 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 DEFB114Q30KQ6 69 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 CTRB2Q6GPI1 263 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 THOC7Q6I9Y2 204 aaKnown RBP9.28□□□□□ -0.92
SPG11-219ENST00000559822 OR4A47Q6IF82 309 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 GVQW1Q8N7I0 195 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 OR5AP2Q8NGF4 316 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 GIMAP1Q8WWP7 306 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 S100A16Q96FQ6 103 aaKnown RBP9.28□□□□□ -0.92
SPG11-219ENST00000559822 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 SRSF8Q9BRL6 282 aaKnown RBP9.28□□□□□ -0.92
SPG11-219ENST00000559822 COMMD5Q9GZQ3 224 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 PLEKHA3Q9HB20 300 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 IFT46Q9NQC8 304 aa9.28□□□□□ -0.92
SPG11-219ENST00000559822 ZC4H2Q9NQZ6 224 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms