RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 SSX5O60225 188 aa8.78□□□□□ -1
USP3-214ENST00000559718 OR2C1O95371 312 aa8.78□□□□□ -1
USP3-214ENST00000559718 IGHV3-23P01764 117 aa8.78□□□□□ -1
USP3-214ENST00000559718 IL6RP08887 468 aaPredicted RBP8.78□□□□□ -1
USP3-214ENST00000559718 RBMY1DP0C7P1 496 aaKnown RBP8.78□□□□□ -1
USP3-214ENST00000559718 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
USP3-214ENST00000559718 DEFB114Q30KQ6 69 aa8.78□□□□□ -1
USP3-214ENST00000559718 DEFB125Q8N687 156 aa8.78□□□□□ -1
USP3-214ENST00000559718 NECAP1Q8NC96 275 aa8.78□□□□□ -1
USP3-214ENST00000559718 OR2K2Q8NGT1 345 aa8.78□□□□□ -1
USP3-214ENST00000559718 NEURL2Q9BR09 285 aa8.78□□□□□ -1
USP3-214ENST00000559718 CENPOQ9BU64 300 aa8.78□□□□□ -1
USP3-214ENST00000559718 OR51E2Q9H255 320 aa8.78□□□□□ -1
USP3-214ENST00000559718 SPATA2Q9UM82 520 aa8.78□□□□□ -1
USP3-214ENST00000559718 PRELID3BQ9Y3B1 194 aa8.78□□□□□ -1
USP3-214ENST00000559718 CEPT1Q9Y6K0 416 aa8.78□□□□□ -1
USP3-214ENST00000559718 S4R3C0 116 aa8.78□□□□□ -1
USP3-214ENST00000559718 HYDINQ4G0P3 5121 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 C2orf70A6NJV1 201 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 NOTOA8MTQ0 251 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 AIREO43918 545 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 CREBL2O60519 120 aaPredicted RBP8.77□□□□□ -1.01
USP3-214ENST00000559718 KBTBD11O94819 623 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 NDUFB8O95169 186 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 IFNA6P05013 189 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 CTXN2P0C2S0 81 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 PTHLHP12272 177 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 MYOD1P15172 320 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 AREGP15514 252 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 CD36P16671 472 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 GALP22466 123 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 CNIH2Q6PI25 160 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 PUSL1Q8N0Z8 303 aaKnown RBP8.77□□□□□ -1.01
USP3-214ENST00000559718 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 TCTEX1D2Q8WW35 142 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 CACNG8Q8WXS5 425 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 CCDC140Q96MF4 163 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 FYTTD1Q96QD9 318 aaKnown RBP8.77□□□□□ -1.01
USP3-214ENST00000559718 OR2A7Q96R45 310 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 DCSTAMPQ9H295 470 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 TXNL4BQ9NX01 149 aaKnown RBP8.77□□□□□ -1.01
USP3-214ENST00000559718 TAS2R8Q9NYW2 309 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 DAPK2Q9UIK4 370 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 FBXL7Q9UJT9 491 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 ZNF257Q9Y2Q1 563 aa8.77□□□□□ -1.01
USP3-214ENST00000559718 MRPS7Q9Y2R9 242 aaKnown RBP8.77□□□□□ -1.01
USP3-214ENST00000559718 TPPPO94811 219 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 FOLR2P14207 255 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 PSMB9P28065 219 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 KIR2DS2P43631 304 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 RPL27AP46776 148 aaKnown RBP8.76□□□□□ -1.01
USP3-214ENST00000559718 HSPA13P48723 471 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 GNG2P59768 71 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 ARL6IP1Q15041 203 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 GUCA2BQ16661 112 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 SSX9Q7RTT3 188 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 OR4S2Q8NH73 311 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 TMEM167AQ8TBQ9 72 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 LGALS14Q8TCE9 139 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 WDR89Q96FK6 387 aaPredicted RBP8.76□□□□□ -1.01
USP3-214ENST00000559718 HSD17B10Q99714 261 aaKnown RBP8.76□□□□□ -1.01
USP3-214ENST00000559718 VCX3BQ9H321 246 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 SRD5A3Q9H8P0 318 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 SLC2A9Q9NRM0 540 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 LYSTQ99698 3801 aa8.76□□□□□ -1.01
USP3-214ENST00000559718 ERICH4A6NGS2 130 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 CGB1A6NKQ9 187 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 NPIPB5A8MRT5 1133 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 TNFSF12O43508 249 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
USP3-214ENST00000559718 SLC22A5O76082 557 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 REG1AP05451 166 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 CLEC2LP0C7M8 214 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 ZNF735P0CB33 412 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 FGF9P31371 208 aaPredicted RBP8.75□□□□□ -1.01
USP3-214ENST00000559718 UBE2UQ5VVX9 321 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 CLEC19AQ6UXS0 136 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 SLC25A42Q86VD7 318 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 LAX1Q8IWV1 398 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 SPARTQ8N0X7 666 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 RNF167Q9H6Y7 350 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 ZC4H2Q9NQZ6 224 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 CCL28Q9NRJ3 127 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 SLC2A8Q9NY64 477 aa8.75□□□□□ -1.01
USP3-214ENST00000559718 RRP15Q9Y3B9 282 aaKnown RBP8.75□□□□□ -1.01
USP3-214ENST00000559718 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 OR11H12B2RN74 326 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 LGALS9O00182 355 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 FCER2P06734 321 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 CRYGCP07315 174 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 CBLN1P23435 193 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 PSMB6P28072 239 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 SDC2P34741 201 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 ARL3P36405 182 aa8.74□□□□□ -1.01
USP3-214ENST00000559718 GABARAPL2P60520 117 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms