RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 STOML3Q8TAV4 291 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 ST8SIA2Q92186 375 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 MAGT1Q9H0U3 335 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 TBL2Q9Y4P3 447 aaKnown RBP13.34□□□□□ -0.27
TPM1-219ENST00000559397 SONP18583 2426 aaKnown RBP13.34□□□□□ -0.27
TPM1-219ENST00000559397 CUBNO60494 3623 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 LY6LH3BQJ8 138 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 TAAR5O14804 337 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 CHST1O43916 411 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 SSSCA1O60232 199 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 HTR1DP28221 377 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 SAA4P35542 130 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 ARHGDIBP52566 201 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 PAX9P55771 341 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 BPIFB3P59826 476 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 NDUFA5Q16718 116 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 AARDQ4LEZ3 155 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 MINOS1Q5TGZ0 78 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 H2BFWTQ7Z2G1 175 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 LHFPL4Q7Z7J7 247 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 C17orf50Q8WW18 174 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
TPM1-219ENST00000559397 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
TPM1-219ENST00000559397 UBQLN2Q9UHD9 624 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 SOX21Q9Y651 276 aaPredicted RBP13.34□□□□□ -0.27
TPM1-219ENST00000559397 MINOS1-NBL1R4GNA1 71 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 MXRA5Q9NR99 2828 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 NQO2P16083 231 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 POU2AF1Q16633 256 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 DHRS7BQ6IAN0 325 aaPredicted RBP13.33□□□□□ -0.28
TPM1-219ENST00000559397 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 RAB40CQ96S21 281 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 LYRM2Q9NU23 88 aaPredicted RBP13.33□□□□□ -0.28
TPM1-219ENST00000559397 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 HIVEP2P31629 2446 aa13.33□□□□□ -0.28
TPM1-219ENST00000559397 WRBO00258 174 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 SYNGR2O43760 224 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 NXPH3O95157 252 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 SPDEFO95238 335 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 HNF1AP20823 631 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 LGALS4P56470 323 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 VAMP2P63027 116 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 TAGLNQ01995 201 aaKnown RBP13.32□□□□□ -0.28
TPM1-219ENST00000559397 C9orf139Q6ZV77 190 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 BCL6BQ8N143 479 aaPredicted RBP13.32□□□□□ -0.28
TPM1-219ENST00000559397 OR5AN1Q8NGI8 311 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 MRPL20Q9BYC9 149 aaKnown RBP13.32□□□□□ -0.28
TPM1-219ENST00000559397 DPM3Q9P2X0 92 aa13.32□□□□□ -0.28
TPM1-219ENST00000559397 AMMECR1Q9Y4X0 333 aaPredicted RBP13.32□□□□□ -0.28
TPM1-219ENST00000559397 LEUTXA8MZ59 168 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 CRYZL1O95825 349 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 HTR2BP41595 481 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 DIAPH2-AS1Q14236 149 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 SCARB1Q8WTV0 552 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 ZC4H2Q9NQZ6 224 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 SLC35D1Q9NTN3 355 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 FBXL17Q9UF56 701 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 WSB1Q9Y6I7 421 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 A0A0U1RQK1 487 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 RPS10-NUDT3A0A1W2PQS6 291 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 FAM24AA6NFZ4 105 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 INAFM1C9JVW0 142 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 GAPDHP04406 335 aaKnown RBP13.31□□□□□ -0.28
TPM1-219ENST00000559397 OR9G9P0C7N8 305 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 RRASP10301 218 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 IL3RAP26951 378 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 SRP14P37108 136 aaKnown RBP13.31□□□□□ -0.28
TPM1-219ENST00000559397 TAS2R30P59541 319 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 ERVK-16P61578 105 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-219ENST00000559397 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 TPTE2P1Q5T6R2 138 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 TMEM252Q8N6L7 170 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 MALSU1Q96EH3 234 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 PHYHIPLQ96FC7 376 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
TPM1-219ENST00000559397 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 MS4A7Q9GZW8 240 aaPredicted RBP13.31□□□□□ -0.28
TPM1-219ENST00000559397 SLC25A31Q9H0C2 315 aa13.31□□□□□ -0.28
TPM1-219ENST00000559397 H0YJW9 148 aa13.3□□□□□ -0.28
TPM1-219ENST00000559397 PAX6P26367 422 aa13.3□□□□□ -0.28
TPM1-219ENST00000559397 TUSC1Q2TAM9 212 aa13.3□□□□□ -0.28
TPM1-219ENST00000559397 ALKAL2Q6UX46 152 aa13.3□□□□□ -0.28
TPM1-219ENST00000559397 CDC42EP3Q9UKI2 254 aa13.3□□□□□ -0.28
TPM1-219ENST00000559397 NSD1Q96L73 2696 aaPredicted RBP13.29□□□□□ -0.28
TPM1-219ENST00000559397 MED6O75586 246 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 HRASP01112 189 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 IL6RP08887 468 aaPredicted RBP13.29□□□□□ -0.28
TPM1-219ENST00000559397 TPT1P13693 172 aaKnown RBP13.29□□□□□ -0.28
TPM1-219ENST00000559397 CEACAM3P40198 252 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 CAV2P51636 162 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 UBE2KP61086 200 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 RPL23AP62750 156 aaKnown RBP13.29□□□□□ -0.28
TPM1-219ENST00000559397 NHLH2Q02577 135 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 SSX2Q16385 188 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 CLLU1Q5K131 121 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms