RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 RAMP3O60896 148 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 PEX14O75381 377 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 FGF2P09038 288 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 H2AFB2P0C5Z0 115 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 BRWD1-AS2P59051 145 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 HNF4GQ14541 408 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 OR2B11Q5JQS5 317 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 CCBE1Q6UXH8 406 aaPredicted RBP13.29□□□□□ -0.28
PSEN1-224ENST00000559361 TMEM219Q86XT9 240 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 WFDC9Q8NEX5 89 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 WIPF2Q8TF74 440 aaPredicted RBP13.29□□□□□ -0.28
PSEN1-224ENST00000559361 TP53RKQ96S44 253 aa13.29□□□□□ -0.28
PSEN1-224ENST00000559361 K7EIL1 84 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 CDS2O95674 445 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 OR5AC1P0C628 307 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 ZNF585BQ52M93 769 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 FAM71E2Q8N5Q1 922 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 C5orf56Q8N8D9 126 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 TEX45Q8NA69 505 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 OR4A5Q8NH83 315 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 GLYATL2Q8WU03 294 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 RHOVQ96L33 236 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 RASL11BQ9BPW5 248 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 MARVELD1Q9BSK0 173 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 PLSCR3Q9NRY6 295 aa13.28□□□□□ -0.28
PSEN1-224ENST00000559361 MARCH11A6NNE9 402 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 CHST1O43916 411 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 PRAF2O60831 178 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 S1PR2O95136 353 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 SFT2D2O95562 160 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 OR4E1P0C645 316 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 VSIG10L2P0DP72 767 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 VAMP1P23763 118 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 LPAR6P43657 344 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 SUPT4H1P63272 117 aaKnown RBP13.27□□□□□ -0.29
PSEN1-224ENST00000559361 PSG5Q15238 335 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 C5orf64Q2M2E5 130 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 NSUN5P1Q3KNT7 163 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 C4orf46Q504U0 113 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 Q8N9W7 124 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 MINDY2Q8NBR6 621 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 RBPMSQ93062 196 aaKnown RBP13.27□□□□□ -0.29
PSEN1-224ENST00000559361 R3HDM4Q96D70 268 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 TMEM56Q96MV1 263 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 BET1LQ9NYM9 111 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
PSEN1-224ENST00000559361 FLVCR2Q9UPI3 526 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 TMEM56-RWDD3S4R434 201 aa13.27□□□□□ -0.29
PSEN1-224ENST00000559361 TRAV6A0A075B6T7 132 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 DUXBA0A1W2PPF3 345 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 OR2A4O95047 310 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 DUS4LO95620 317 aaKnown RBP13.26□□□□□ -0.29
PSEN1-224ENST00000559361 IGLV2-23P01705 113 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 HLA-AP01891 365 aaKnown RBP13.26□□□□□ -0.29
PSEN1-224ENST00000559361 HLA-DRB1P01911 266 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 CD28P10747 220 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 ANXA7P20073 488 aaKnown RBP13.26□□□□□ -0.29
PSEN1-224ENST00000559361 F2RL1P55085 397 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 RAB25P57735 213 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 DHRS2Q13268 280 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 PPP1R1AQ13522 171 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 TMEM187Q14656 261 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 PLGLAQ15195 96 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 LYG2Q86SG7 212 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 ZNF695Q8IW36 515 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 LGI3Q8N145 548 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 LRTM2Q8N967 370 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 DMBX1Q8NFW5 382 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 OR4F17Q8NGA8 305 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 OR2A7Q96R45 310 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 SERTAD4Q9NUC0 356 aa13.26□□□□□ -0.29
PSEN1-224ENST00000559361 C9orf170A2RU37 121 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
PSEN1-224ENST00000559361 SLC25A17O43808 307 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 FBXO24O75426 580 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 DHFRP00374 187 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 IL5P05113 134 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 SAA1P0DJI8 122 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-224ENST00000559361 SP6Q3SY56 376 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 LIN54Q6MZP7 749 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 PPP1R27Q86WC6 154 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 PUSL1Q8N0Z8 303 aaKnown RBP13.25□□□□□ -0.29
PSEN1-224ENST00000559361 Q8N2B8 174 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 COQ8AQ8NI60 647 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 RRNAD1Q96FB5 475 aaKnown RBP13.25□□□□□ -0.29
PSEN1-224ENST00000559361 RITA1Q96K30 269 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 PRSS22Q9GZN4 317 aa13.25□□□□□ -0.29
PSEN1-224ENST00000559361 GPN1Q9HCN4 374 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-224ENST00000559361 A0A0B4J2A0 478 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 CRYGBP07316 175 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 MAS1LP35410 378 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 AKR1C2P52895 323 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 MMD2Q8IY49 270 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 SEC22AQ96IW7 307 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 WWC2-AS2Q96NR7 200 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms