RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 SLC25A42Q86VD7 318 aa11.5□□□□□ -0.57
SMAD6-203ENST00000558937 NECAP1Q8NC96 275 aa11.5□□□□□ -0.57
SMAD6-203ENST00000558937 FYTTD1Q96QD9 318 aaKnown RBP11.5□□□□□ -0.57
SMAD6-203ENST00000558937 SLC5A7Q9GZV3 580 aa11.5□□□□□ -0.57
SMAD6-203ENST00000558937 ZNF257Q9Y2Q1 563 aa11.5□□□□□ -0.57
SMAD6-203ENST00000558937 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
SMAD6-203ENST00000558937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.49□□□□□ -0.57
SMAD6-203ENST00000558937 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 E7EUB6 86 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 H0Y980 276 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 AIREO43918 545 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 HRASP01112 189 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 ZNF735P0CB33 412 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 MAS1LP35410 378 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 CBX5P45973 191 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 SGPP2Q8IWX5 399 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 SPAG16Q8N0X2 631 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 SIGLEC8Q9NYZ4 499 aa11.49□□□□□ -0.57
SMAD6-203ENST00000558937 DPPA5A6NC42 116 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 XRCC3O43542 346 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 MYOD1P15172 320 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 LSM3P62310 102 aaKnown RBP11.48□□□□□ -0.57
SMAD6-203ENST00000558937 RPL8P62917 257 aaKnown RBP11.48□□□□□ -0.57
SMAD6-203ENST00000558937 CATR1Q13166 79 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 UBE2NLQ5JXB2 153 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 TMEM17Q86X19 198 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 CROCCP3Q8IVE0 287 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 Q8N402 240 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 OR5AP2Q8NGF4 316 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 SLC2A9Q9NRM0 540 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 BET1LQ9NYM9 111 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 PEMTQ9UBM1 199 aa11.48□□□□□ -0.57
SMAD6-203ENST00000558937 A0A087WXM4 84 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 IZUMO1RA6ND01 250 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 A8MZ25 164 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 PPP5D1E7EU14 171 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 SULT1C2O00338 296 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMAD6-203ENST00000558937 AREGP15514 252 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 HLA-GP17693 338 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 RPS19P39019 145 aaKnown RBP11.47□□□□□ -0.57
SMAD6-203ENST00000558937 LCN12Q6JVE5 192 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 ZNF818PQ6ZRF7 136 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 TSPAN14Q8NG11 270 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 GIMAP1Q8WWP7 306 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 S100A16Q96FQ6 103 aaKnown RBP11.47□□□□□ -0.57
SMAD6-203ENST00000558937 THAP7Q9BT49 309 aaPredicted RBP11.47□□□□□ -0.57
SMAD6-203ENST00000558937 ZMAT4Q9H898 229 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 VCX3AQ9NNX9 186 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 FBXL7Q9UJT9 491 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 ANAPC10Q9UM13 185 aa11.47□□□□□ -0.57
SMAD6-203ENST00000558937 CGB1A6NKQ9 187 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 NDUFB8O95169 186 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 CRYGCP07315 174 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 PSMB6P28072 239 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 MECP2P51608 486 aaKnown RBP11.46□□□□□ -0.57
SMAD6-203ENST00000558937 TAS2R20P59543 309 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 HERV-K104P61576 105 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 TMEM69Q5SWH9 247 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 ADAMTSL5Q6ZMM2 481 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 SAMD12Q8N8I0 201 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 OR51H1Q8NH63 302 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 OR4A5Q8NH83 315 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 FANCD2OSQ96PS1 177 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 HRASLSQ9HDD0 168 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.57
SMAD6-203ENST00000558937 KMT2CQ8NEZ4 4911 aaKnown RBP11.46□□□□□ -0.58
SMAD6-203ENST00000558937 S1PR2O95136 353 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 HPRT1P00492 218 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 IGHV3-23P01764 117 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 REG1AP05451 166 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 NQO2P16083 231 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 CTRB1P17538 263 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 TAS2R31P59538 309 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 AADACL3Q5VUY0 350 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 CTRB2Q6GPI1 263 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 OR2K2Q8NGT1 345 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
SMAD6-203ENST00000558937 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 AIFM2Q9BRQ8 373 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 S4R3C0 116 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 NBEAL2Q6ZNJ1 2754 aa11.45□□□□□ -0.58
SMAD6-203ENST00000558937 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
SMAD6-203ENST00000558937 UPK2O00526 184 aa11.44□□□□□ -0.58
SMAD6-203ENST00000558937 GGCTO75223 188 aaKnown RBP11.44□□□□□ -0.58
SMAD6-203ENST00000558937 DHFRP00374 187 aa11.44□□□□□ -0.58
SMAD6-203ENST00000558937 HLA-AP01891 365 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms