RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 SMLR1H3BR10 107 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 RGS13O14921 159 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 LY86O95711 162 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 S100GP29377 79 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 CDX1P47902 265 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 INSL3P51460 131 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 HNF4GQ14541 408 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMEM187Q14656 261 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMEM30BQ3MIR4 351 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 SLC5A7Q9GZV3 580 aa12.57□□□□□ -0.4
CDC42BPB-203ENST00000558867 IGKV1D-13A0A0B4J2D9 117 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 DUXBA0A1W2PPF3 345 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 J3QR06 171 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 MPPED1O15442 326 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 SIX6O95475 246 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 IGKV1D-33P01593 117 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 IGKV1-33P01594 117 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 IGKV1-13P0DP09 117 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 SLC25A4P12235 298 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMEM65Q6PI78 240 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 ZBTB34Q8NCN2 500 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR10V1Q8NGI7 309 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
CDC42BPB-203ENST00000558867 DYNC2H1Q8NCM8 4307 aaKnown RBP12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 SPINT2O43291 252 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 HBZP02008 142 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 RPLP1P05386 114 aaKnown RBP12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 ELANEP08246 267 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 CGB3P0DN86 165 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 CGB7P0DN87 165 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 FOXE3Q13461 319 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 ZNF818PQ6ZRF7 136 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR13A1Q8NGR1 328 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 RCHY1Q96PM5 261 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 SLA2Q9H6Q3 261 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR1A1Q9P1Q5 309 aa12.55□□□□□ -0.4
CDC42BPB-203ENST00000558867 C3orf85A0A1B0GTC6 90 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 HSPA12AO43301 675 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 C4BPBP20851 252 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 IL15RAQ13261 267 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 C17orf58Q2M2W7 97 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 Q5BKY6 102 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 C5orf24Q7Z6I8 188 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 LGI3Q8N145 548 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 GLYATL2Q8WU03 294 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 IL1F10Q8WWZ1 152 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 C2orf50Q96LR7 162 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 LIN7CQ9NUP9 197 aaKnown RBP12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 RDH8Q9NYR8 311 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 JPT1Q9UK76 154 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMEM56-RWDD3S4R434 201 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 TENM2Q9NT68 2774 aa12.54□□□□□ -0.4
CDC42BPB-203ENST00000558867 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 A0A1W2PPI3 338 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 H0Y980 276 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 GAPDHP04406 335 aaKnown RBP12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 RPA2P15927 270 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 VDAC1P21796 283 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 UCP1P25874 307 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 GPR12P47775 334 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 IFITM2Q01629 132 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 MOB3BQ86TA1 216 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR10A7Q8NGE5 316 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 OR1L1Q8NH94 360 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 PDCD10Q9BUL8 212 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 CCL28Q9NRJ3 127 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 CALYQ9NYX4 217 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
CDC42BPB-203ENST00000558867 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 LCE6AA0A183 80 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 CCSO14618 274 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 YPEL1O60688 119 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 CDS2O95674 445 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 IFNA21P01568 189 aa12.52□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR8U8P0C7N1 319 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms