RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RNASE6Q93091 150 aaKnown RBP1.93□□□□□ -2.1
CASC4-206ENST00000558847 CNBD2Q96M20 576 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 COQ4Q9Y3A0 265 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 ABCC12Q96J65 1359 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 P0DMU3 169 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 FAM231AP0DMU4 169 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 FAM231CP0DMU5 169 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 CD79AP11912 226 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 CA5AP35218 305 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 RAB13P51153 203 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 SPCS3P61009 180 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 PSME3P61289 254 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 HIST1H4AP62805 103 aaKnown RBP1.92□□□□□ -2.1
CASC4-206ENST00000558847 ERHP84090 104 aaKnown RBP1.92□□□□□ -2.1
CASC4-206ENST00000558847 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 TNFAIP8L3Q5GJ75 292 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 SPOPLQ6IQ16 392 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 Q6ZTI0 123 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 Q8NDZ9 215 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 SLC35B4Q969S0 331 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 PPP1R14BQ96C90 147 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 CCDC42Q96M95 316 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 UCK1Q9HA47 277 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 VPS29Q9UBQ0 182 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 TIMM9Q9Y5J7 89 aa1.92□□□□□ -2.1
CASC4-206ENST00000558847 V9GYY5 206 aaPredicted RBP1.92□□□□□ -2.1
CASC4-206ENST00000558847 SNAPC4Q5SXM2 1469 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 IGLV3-9A0A075B6K5 115 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 MDFIC2A0A1B0GVS7 189 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 TMEM269A0A1B0GVZ9 245 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 ARRDC5A6NEK1 342 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 LST1O00453 97 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 PLA2G10O15496 165 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 NOS1APO75052 506 aaPredicted RBP1.91□□□□□ -2.1
CASC4-206ENST00000558847 BPGMP07738 259 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 SRP19P09132 144 aaKnown RBP1.91□□□□□ -2.1
CASC4-206ENST00000558847 ZNF705DP0CH99 300 aaPredicted RBP1.91□□□□□ -2.1
CASC4-206ENST00000558847 CSN1S1P47710 185 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 OR4D2P58180 307 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 GLO1Q04760 184 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 SYPL2Q5VXT5 272 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 C8orf74Q6P047 294 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 TRAPPC5Q8IUR0 188 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 C20orf196Q8IYI0 205 aa1.91□□□□□ -2.1
CASC4-206ENST00000558847 ATG2BQ96BY7 2078 aa1.9□□□□□ -2.1
CASC4-206ENST00000558847 CACNA1GO43497 2377 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 EEF1E1-BLOC1S5C9J1V9 151 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 J3QQQ9 107 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 PSMD12O00232 456 aaPredicted RBP1.9□□□□□ -2.11
CASC4-206ENST00000558847 CDKN2CP42773 168 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 TPI1P60174 286 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 RPL26P61254 145 aaKnown RBP1.9□□□□□ -2.11
CASC4-206ENST00000558847 GRK1Q15835 563 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 SSX8Q7RTT4 187 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 DCANP1Q8TF63 244 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 DOHHQ9BU89 302 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 RPL26L1Q9UNX3 145 aaKnown RBP1.9□□□□□ -2.11
CASC4-206ENST00000558847 SAMHD1Q9Y3Z3 626 aaKnown RBP1.9□□□□□ -2.11
CASC4-206ENST00000558847 RTEL1-TNFRSF6BF6WH68 1400 aa1.9□□□□□ -2.11
CASC4-206ENST00000558847 LTBP2Q14767 1821 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 CACNA1SQ13698 1873 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 MYO16Q9Y6X6 1858 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 A8MUN3 132 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 C1QAP02745 245 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 FGF6P10767 208 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 MSNP26038 577 aaKnown RBP1.89□□□□□ -2.11
CASC4-206ENST00000558847 S100A7P31151 101 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 CCR2P41597 374 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 IDH3GP51553 393 aaPredicted RBP1.89□□□□□ -2.11
CASC4-206ENST00000558847 MYL6P60660 151 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 TMEM258P61165 79 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 C9orf64Q5T6V5 341 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 ZNF705AQ6ZN79 300 aaPredicted RBP1.89□□□□□ -2.11
CASC4-206ENST00000558847 PACRGLQ8N7B6 248 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 DCUN1D1Q96GG9 259 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 PARD6GQ9BYG4 376 aaPredicted RBP1.89□□□□□ -2.11
CASC4-206ENST00000558847 TTTY13Q9BZ97 58 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 ZNF532Q9HCE3 1301 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 CHD5Q8TDI0 1954 aa1.89□□□□□ -2.11
CASC4-206ENST00000558847 TRPM6Q9BX84 2022 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 KDM5BQ9UGL1 1544 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 I3L521 148 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 MSMBP08118 114 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 IFI30P13284 250 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 NFYAP23511 347 aaPredicted RBP1.88□□□□□ -2.11
CASC4-206ENST00000558847 IFITM2Q01629 132 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 AKIRIN2Q53H80 203 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 DYNAPQ8N1N2 210 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 LRRC25Q8N386 305 aaPredicted RBP1.88□□□□□ -2.11
CASC4-206ENST00000558847 ZNF565Q8N9K5 539 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 OR1L8Q8NGR8 309 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 ACOT12Q8WYK0 555 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 ANKRD7Q92527 254 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 IMMP2LQ96T52 175 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 COMMD5Q9GZQ3 224 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 OR51V1Q9H2C8 321 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 C8orf4Q9NR00 106 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 PRTFDC1Q9NRG1 225 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms